RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 GAB3Q8WWW8 586 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 ZNF641Q96N77 438 aaPredicted RBP14.03□□□□□ -0.16
TRAF4-215ENST00000584944 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 OSBPL9Q96SU4 736 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 SEMA3CQ99985 751 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 ITM2CQ9NQX7 267 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 TRHDEQ9UKU6 1024 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 FZD4Q9ULV1 537 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 SNX12Q9UMY4 172 aa14.03□□□□□ -0.16
TRAF4-215ENST00000584944 CNOT1A5YKK6 2376 aaKnown RBP14.02□□□□□ -0.16
TRAF4-215ENST00000584944 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 MEI4A8MW99 385 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 SLC30A4O14863 429 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 INSIG1O15503 277 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 RHOBTB1O94844 696 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 SERPINF2P08697 491 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 ITGB7P26010 798 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 GKP32189 559 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 PAFAH1B1P43034 410 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 NEK3P51956 506 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 EPHB1P54762 984 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 SNX1Q13596 522 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 PRPSAP1Q14558 356 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 ERAP2Q6P179 960 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 PRR23CQ6ZRP0 262 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 ARHGEF18Q6ZSZ5 1173 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 PID1Q7Z2X4 250 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 TTC7BQ86TV6 843 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 FAM160A2Q8N612 972 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-215ENST00000584944 CCDC89Q8N998 374 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 OR14C36Q8NHC7 312 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 MAML1Q92585 1016 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 ZNF592Q92610 1267 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 C16orf45Q96MC5 204 aaPredicted RBP14.02□□□□□ -0.17
TRAF4-215ENST00000584944 KLHL32Q96NJ5 620 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 PPP1R2P1Q96PQ5 205 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 WDR24Q96S15 920 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 MGME1Q9BQP7 344 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 CEP41Q9BYV8 373 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 CPEB1Q9BZB8 566 aaKnown RBP14.02□□□□□ -0.17
TRAF4-215ENST00000584944 SGK2Q9HBY8 427 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 RSPH14Q9UHP6 348 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 SAR1BQ9Y6B6 198 aa14.02□□□□□ -0.17
TRAF4-215ENST00000584944 MYO18AQ92614 2054 aaKnown RBP14.02□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3DA0A087WVF3 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3IA0A087WXS9 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3EA0A087X179 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3KA0A087X1G2 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 A0A1W2PQ67 120 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 GOLGA6CA6NDK9 693 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 GOLGA6BA6NDN3 693 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3FA6NER0 549 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3LB9A6J9 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 ZNF821O75541 412 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3HP0C7X1 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 GOLGA6DP0CG33 693 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 RBL1P28749 1068 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 P2RY2P41231 377 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 ETF1P62495 437 aaKnown RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 CNTN1Q12860 1018 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TEX44Q53QW1 395 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3GQ6DHY5 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3CQ6IPX1 549 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 BRAT1Q6PJG6 821 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 ERN2Q76MJ5 926 aaKnown RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 CAMK1DQ8IU85 385 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TBC1D3Q8IZP1 549 aaPredicted RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TEX26Q8N6G2 289 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 C1orf54Q8WWF1 131 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 ATG4AQ8WYN0 398 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 SNX19Q92543 992 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 FOXJ1Q92949 421 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 IFT43Q96FT9 208 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 TOE1Q96GM8 510 aaKnown RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 CNTNAP3BQ96NU0 1288 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 CNTNAP3Q9BZ76 1288 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 SUV39H2Q9H5I1 410 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 NOD2Q9HC29 1040 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 CD248Q9HCU0 757 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 GOLGA6AQ9NYA3 693 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 USP36Q9P275 1121 aaKnown RBP14.01□□□□□ -0.17
TRAF4-215ENST00000584944 SARDHQ9UL12 918 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 WASF2Q9Y6W5 498 aa14.01□□□□□ -0.17
TRAF4-215ENST00000584944 NUP205Q92621 2012 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 TCRBV7S2A1N4TA0A589 114 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 BCLAF3A2AJT9 711 aaKnown RBP14□□□□□ -0.17
TRAF4-215ENST00000584944 C16orf96A6NNT2 1141 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 CES2O00748 559 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 SLC7A4O43246 635 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 GDF9O60383 454 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 SOCS5O75159 536 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 PCDH8O95206 1070 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 PIGNO95427 931 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 SEMA4FO95754 770 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 PEX11BO96011 259 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 IFNB1P01574 187 aa14□□□□□ -0.17
TRAF4-215ENST00000584944 TUBB4AP04350 444 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms