RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 FZD2Q14332 565 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 FIGNQ5HY92 759 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 RFX8Q6ZV50 586 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 OR4C6Q8NH72 309 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 FNIP1Q8TF40 1166 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 ASB12Q8WXK4 309 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 IFT43Q96FT9 208 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 CPEB1Q9BZB8 566 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 ISCUQ9H1K1 167 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 DONSONQ9NYP3 566 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 IPO11Q9UI26 975 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 ANKRD36A6QL64 1941 aa21.55■■□□□ 1.04
CSNK1D-221ENST00000582844 SPTY2D1-AS1A0A0U1RR47 76 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 EIF3CLB5ME19 914 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 PRPSAP2O60256 369 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 PRAMEF11O60813 436 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 MMP20O60882 483 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 LRCH4O75427 683 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 PIGNO95427 931 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 ERCC2P18074 760 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 RABIFP47224 123 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 KLHL40Q2TBA0 621 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 PPP6R3Q5H9R7 873 aaPredicted RBP21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 TPRG1LQ5T0D9 272 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 PDCD7Q8N8D1 485 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 CENPTQ96BT3 561 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 EIF3CQ99613 913 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 DKK3Q9UBP4 350 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 SCINQ9Y6U3 715 aa21.54■■□□□ 1.04
CSNK1D-221ENST00000582844 URB1O60287 2271 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 ARHGAP42A6NI28 874 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 ACP1P24666 158 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 HNF1BP35680 557 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 PBX1P40424 430 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 ILKQ13418 452 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 PDE1CQ14123 709 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 HS1BP3Q53T59 392 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 HES3Q5TGS1 186 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 HGSNATQ68CP4 663 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 NCAPGQ9BPX3 1015 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 WRAP53Q9BUR4 548 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 MRPL47Q9HD33 250 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 DKK4Q9UBT3 224 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 KLF15Q9UIH9 416 aa21.53■■□□□ 1.04
CSNK1D-221ENST00000582844 BUB1BO60566 1050 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 NEBLO76041 1014 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 TM7SF2O76062 418 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 CSF2P04141 144 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 MYBL1P10243 752 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 UBASH3AP57075 661 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 PFN3P60673 137 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 HNRNPKP61978 463 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 TPM4P67936 248 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 DAB2P98082 770 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 TARDBPQ13148 414 aaKnown RBP eCLIP21.52■■□□□ 1.043e-6■■■■□ 20.8
CSNK1D-221ENST00000582844 AFMIDQ63HM1 303 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 VPS36Q86VN1 386 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 PARGQ86W56 976 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 ARHGAP12Q8IWW6 846 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 NPWQ8N729 165 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 DENND6BQ8NEG7 585 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 CXorf40AQ8TE69 158 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 CPLX3Q8WVH0 158 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 TRIM11Q96F44 468 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 SUV39H2Q9H5I1 410 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 CWC15Q9P013 229 aaKnown RBP21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 RAXQ9Y2V3 346 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 ADAMTS20P59510 1910 aa21.52■■□□□ 1.04
CSNK1D-221ENST00000582844 NBEAQ8NFP9 2946 aa21.52■■□□□ 1.03
CSNK1D-221ENST00000582844 ITPR1Q14643 2758 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 A0A1W2PQJ5 194 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 NEMP2A6NFY4 417 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 SCAMP1O15126 338 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 MYF5P13349 255 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 NME1P15531 152 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 TCF4P15884 667 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 XPAP23025 273 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 RGRP47804 291 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 TDRD12Q587J7 1177 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 ARHGAP36Q6ZRI8 547 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 PSTKQ8IV42 348 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 TSEN2Q8NCE0 465 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 MBNL1Q9NR56 388 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 NLGN3Q9NZ94 848 aa21.51■■□□□ 1.03
CSNK1D-221ENST00000582844 DFFAO00273 331 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 PALMO75781 387 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 ALPPL2P10696 532 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 IL1R2P27930 398 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 IGFALSP35858 605 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 HCAR3P49019 387 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 UGP2Q16851 508 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 TMEM52BQ4KMG9 183 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 C19orf48Q6RUI8 117 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 SRLQ86TD4 932 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 CAMK1DQ8IU85 385 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 TP53INP2Q8IXH6 220 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 ZNF548Q8NEK5 533 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 HCAR2Q8TDS4 363 aa21.5■■□□□ 1.03
CSNK1D-221ENST00000582844 SYN2Q92777 582 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms