RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 FZD2Q14332 565 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 FIGNQ5HY92 759 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 RFX8Q6ZV50 586 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 OR4C6Q8NH72 309 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 FNIP1Q8TF40 1166 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 ASB12Q8WXK4 309 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 IFT43Q96FT9 208 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 CPEB1Q9BZB8 566 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 ISCUQ9H1K1 167 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 DONSONQ9NYP3 566 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 IPO11Q9UI26 975 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 ANKRD36A6QL64 1941 aa21.55■■□□□ 1.04
CSNK1D-215ENST00000580784 SPTY2D1-AS1A0A0U1RR47 76 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 EIF3CLB5ME19 914 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 PRPSAP2O60256 369 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 PRAMEF11O60813 436 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 MMP20O60882 483 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 LRCH4O75427 683 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 PIGNO95427 931 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 ERCC2P18074 760 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 RABIFP47224 123 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 KLHL40Q2TBA0 621 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 PPP6R3Q5H9R7 873 aaPredicted RBP21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 TPRG1LQ5T0D9 272 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 PDCD7Q8N8D1 485 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 CENPTQ96BT3 561 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 EIF3CQ99613 913 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 DKK3Q9UBP4 350 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 SCINQ9Y6U3 715 aa21.54■■□□□ 1.04
CSNK1D-215ENST00000580784 URB1O60287 2271 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 ARHGAP42A6NI28 874 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 ACP1P24666 158 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 HNF1BP35680 557 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 PBX1P40424 430 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 ILKQ13418 452 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 PDE1CQ14123 709 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 HS1BP3Q53T59 392 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 HES3Q5TGS1 186 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 HGSNATQ68CP4 663 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 NCAPGQ9BPX3 1015 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 WRAP53Q9BUR4 548 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 MRPL47Q9HD33 250 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 DKK4Q9UBT3 224 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 KLF15Q9UIH9 416 aa21.53■■□□□ 1.04
CSNK1D-215ENST00000580784 BUB1BO60566 1050 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 NEBLO76041 1014 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 TM7SF2O76062 418 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 CSF2P04141 144 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 MYBL1P10243 752 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 UBASH3AP57075 661 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 PFN3P60673 137 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 HNRNPKP61978 463 aaKnown RBP eCLIP21.52■■□□□ 1.046e-9■□□□□ 9.6
CSNK1D-215ENST00000580784 TPM4P67936 248 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 DAB2P98082 770 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 TARDBPQ13148 414 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 AFMIDQ63HM1 303 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 VPS36Q86VN1 386 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 PARGQ86W56 976 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 ARHGAP12Q8IWW6 846 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 NPWQ8N729 165 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 DENND6BQ8NEG7 585 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 CXorf40AQ8TE69 158 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 CPLX3Q8WVH0 158 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 TRIM11Q96F44 468 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 SUV39H2Q9H5I1 410 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 CWC15Q9P013 229 aaKnown RBP21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 RAXQ9Y2V3 346 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 ADAMTS20P59510 1910 aa21.52■■□□□ 1.04
CSNK1D-215ENST00000580784 NBEAQ8NFP9 2946 aa21.52■■□□□ 1.03
CSNK1D-215ENST00000580784 ITPR1Q14643 2758 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 A0A1W2PQJ5 194 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 NEMP2A6NFY4 417 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 SCAMP1O15126 338 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 MYF5P13349 255 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 NME1P15531 152 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 TCF4P15884 667 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 XPAP23025 273 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 RGRP47804 291 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 TDRD12Q587J7 1177 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 ARHGAP36Q6ZRI8 547 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 PSTKQ8IV42 348 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 TSEN2Q8NCE0 465 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 MBNL1Q9NR56 388 aaKnown RBP21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 NLGN3Q9NZ94 848 aa21.51■■□□□ 1.03
CSNK1D-215ENST00000580784 DFFAO00273 331 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 PALMO75781 387 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 ALPPL2P10696 532 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 IL1R2P27930 398 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 IGFALSP35858 605 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 HCAR3P49019 387 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 UGP2Q16851 508 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 TMEM52BQ4KMG9 183 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 C19orf48Q6RUI8 117 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 SRLQ86TD4 932 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 CAMK1DQ8IU85 385 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 TP53INP2Q8IXH6 220 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 ZNF548Q8NEK5 533 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 HCAR2Q8TDS4 363 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 SYN2Q92777 582 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms