RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 UVRAGQ9P2Y5 699 aa20.38■□□□□ 0.85
SMG8-204ENST00000580498 SEPT3Q9UH03 358 aa20.38■□□□□ 0.85
SMG8-204ENST00000580498 ZFR2Q9UPR6 939 aaKnown RBP20.38■□□□□ 0.85
SMG8-204ENST00000580498 WASF3Q9UPY6 502 aa20.38■□□□□ 0.85
SMG8-204ENST00000580498 IGLON5A6NGN9 336 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 AKR1B10O60218 316 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 C1SP09871 688 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 ATXN1LP0C7T5 689 aaKnown RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 HSPA9P38646 679 aaKnown RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 HNRNPKP61978 463 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMG8-204ENST00000580498 POLR2LP62875 67 aaKnown RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 ZNF235Q14590 738 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 ZFYVE27Q5T4F4 411 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 Q6ZSR6 202 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 ABI3BPQ7Z7G0 1075 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 SPATS2Q86XZ4 545 aaKnown RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 MAP7D3Q8IWC1 876 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 ARFGAP1Q8N6T3 406 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 ZNF564Q8TBZ8 553 aaPredicted RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 EXOC2Q96KP1 924 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 KLC2Q9H0B6 622 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 SUV39H2Q9H5I1 410 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 CWC15Q9P013 229 aaKnown RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 RCOR3Q9P2K3 495 aaPredicted RBP20.37■□□□□ 0.85
SMG8-204ENST00000580498 KLK13Q9UKR3 277 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 CA5BQ9Y2D0 317 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 PCDHGA1Q9Y5H4 931 aa20.37■□□□□ 0.85
SMG8-204ENST00000580498 J3KR12 359 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 TOR1BO14657 336 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 TOP3BO95985 862 aaKnown RBP20.36■□□□□ 0.85
SMG8-204ENST00000580498 HNRNPH3P31942 346 aaKnown RBP20.36■□□□□ 0.85
SMG8-204ENST00000580498 HNF1BP35680 557 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 EIF4A3P38919 411 aaKnown RBP20.36■□□□□ 0.85
SMG8-204ENST00000580498 ABL2P42684 1182 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 CSNK1DP48730 415 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 THOP1P52888 689 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 BCL2L1Q07817 233 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 CYTH1Q15438 398 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 SLCO6A1Q86UG4 719 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 ATPAF2Q8N5M1 289 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 OR13H1Q8NG92 308 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 C1QTNF2Q9BXJ5 285 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 PDFQ9HBH1 243 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 LHX3Q9UBR4 397 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 COL5A1P20908 1838 aaPredicted RBP20.36■□□□□ 0.85
SMG8-204ENST00000580498 DOCK9Q9BZ29 2069 aa20.36■□□□□ 0.85
SMG8-204ENST00000580498 A0A1W2PQ67 120 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 SSU72P8A0A1W2PR75 194 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 FAM221BA6H8Z2 402 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 RFPL3O75679 317 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 RARAP10276 462 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 CLDN2P57739 230 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 NSUN2Q08J23 767 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMG8-204ENST00000580498 DPYSQ14117 519 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 SLC18A3Q16572 532 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 GCNT7Q6ZNI0 430 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 SRLQ86TD4 932 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 PARGQ86W56 976 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 LRRC49Q8IUZ0 686 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 DUSP23Q9BVJ7 150 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 DNAJC28Q9NX36 388 aa20.35■□□□□ 0.85
SMG8-204ENST00000580498 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.34■□□□□ 0.85
SMG8-204ENST00000580498 C1QTNF9BB2RNN3 333 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 RNF103O00237 685 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 AREL1O15033 823 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 NEBLO76041 1014 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 KRT7P08729 469 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 C1QTNF9P0C862 333 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 CDH6P55285 790 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 AP1S1P61966 158 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 DAB2P98082 770 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 BNIP3Q12983 259 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 ILKQ13418 452 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 SHBQ15464 509 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 ODF2Q5BJF6 829 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 AFMIDQ63HM1 303 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 POLNQ7Z5Q5 900 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 CNGA4Q8IV77 575 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 ATL2Q8NHH9 583 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 BTN2A2Q8WVV5 523 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 CCDC42Q96M95 316 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 CSPG4P5Q96PW8 444 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 ITM2BQ9Y287 266 aa20.34■□□□□ 0.85
SMG8-204ENST00000580498 RIOK3O14730 519 aaKnown RBP20.33■□□□□ 0.85
SMG8-204ENST00000580498 LZTS3O60299 673 aaPredicted RBP20.33■□□□□ 0.85
SMG8-204ENST00000580498 SDC3O75056 442 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 PIGNO95427 931 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 YPEL5P62699 121 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 PDE1CQ14123 709 aaPredicted RBP20.33■□□□□ 0.85
SMG8-204ENST00000580498 LBRQ14739 615 aaKnown RBP20.33■□□□□ 0.85
SMG8-204ENST00000580498 UGP2Q16851 508 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 CYP4V2Q6ZWL3 525 aaPredicted RBP20.33■□□□□ 0.85
SMG8-204ENST00000580498 TMPRSS7Q7RTY8 843 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 KCTD6Q8NC69 237 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 RNF214Q8ND24 703 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 ZCCHC14Q8WYQ9 949 aaKnown RBP20.33■□□□□ 0.85
SMG8-204ENST00000580498 GATA6Q92908 595 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 DNAJC7Q99615 494 aa20.33■□□□□ 0.85
SMG8-204ENST00000580498 CHD8Q9HCK8 2581 aa20.32■□□□□ 0.84
SMG8-204ENST00000580498 MMP20O60882 483 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms