RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ATP6V1DQ9Y5K8 247 aa12.39□□□□□ -0.43
CDK5RAP3-216ENST00000579853 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZMPSTE24O75844 475 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TM7SF2O76062 418 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GNA14O95837 355 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HTR1BP28222 390 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SLC6A3Q01959 620 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 POLD3Q15054 466 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FOXR2Q6PJQ5 311 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 DTX1Q86Y01 620 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZNF683Q8IZ20 524 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RYBPQ8N488 228 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PCDH19Q8TAB3 1148 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 EDEM3Q9BZQ6 932 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GOLPH3LQ9H4A5 285 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RETREG1Q9H6L5 497 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MPP6Q9NZW5 540 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 APPL1Q9UKG1 709 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PCDHGC3Q9UN70 934 aa12.38□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 AREL1O15033 823 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RASGRP1O95267 797 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 POP4O95707 220 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GSRP00390 522 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HGFP14210 728 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PNLIPP16233 465 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GLB1P16278 677 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 IGFALSP35858 605 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ABL2P42684 1182 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SNRPD1P62314 119 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GNA12Q03113 381 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 DEUP1Q05D60 604 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZFP36L1Q07352 338 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FAM183BPQ6ZVS7 135 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HID1Q8IV36 788 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KYQ8NBH2 561 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 OR2AP1Q8NGE2 309 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SPATA20Q8TB22 786 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CXorf40AQ8TE69 158 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 NT5C3BQ969T7 300 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 NPY6RQ99463 290 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TM6SF2Q9BZW4 377 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZYG11BQ9C0D3 744 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 INTS2Q9H0H0 1204 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 HPCAL4Q9UM19 191 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FCF1Q9Y324 198 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ICE1Q9Y2F5 2266 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CELSR2Q9HCU4 2923 aa12.37□□□□□ -0.43
CDK5RAP3-216ENST00000579853 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 STMND1H3BQB6 276 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KRIT1O00522 736 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CASC3O15234 703 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 KRT9P35527 623 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SULT1E1P49888 294 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ATP1A2P50993 1020 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SUOXP51687 545 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ARF5P84085 180 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 RAD51Q06609 339 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SRSF6Q13247 344 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TTC7BQ86TV6 843 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 VASH2Q86V25 355 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZFAND4Q86XD8 727 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CCNJLQ8IV13 435 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 TRIM59Q8IWR1 403 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 WDTC1Q8N5D0 677 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 EPAS1Q99814 870 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 GGT7Q9UJ14 662 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ANAPC2Q9UJX6 822 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ABCA12Q86UK0 2595 aa12.36□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ZW10O43264 779 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MMP20O60882 483 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 UGT2B4P06133 528 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ITIH1P19827 911 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 CR2P20023 1033 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 SCNN1AP37088 669 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 USP8P40818 1118 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MAPK10P53779 464 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 MARSP56192 900 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 PTK2Q05397 1052 aa12.35□□□□□ -0.43
CDK5RAP3-216ENST00000579853 ELP6Q0PNE2 266 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms