RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 RNF14Q9UBS8 474 aa15.73■□□□□ 0.11
SLC6A4-205ENST00000579221 PCDHGC4Q9Y5F7 938 aa15.73■□□□□ 0.11
SLC6A4-205ENST00000579221 CKAP5Q14008 2032 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 C5orf60A6NFR6 353 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 C16orf96A6NNT2 1141 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 KIF2AO00139 706 aaPredicted RBP15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 SOCS5O75159 536 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 GJB3O75712 270 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 CA4P22748 312 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 XPAP23025 273 aaPredicted RBP15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 PAFAH1B1P43034 410 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 NEK3P51956 506 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 POLR2LP62875 67 aaKnown RBP15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 NIPAL4Q0D2K0 466 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 ANKRD20A2Q5SQ80 823 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 ANKRD20A1Q5TYW2 823 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 ANKRD20A3Q5VUR7 823 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 ITPRIPL1Q6GPH6 555 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 BRAT1Q6PJG6 821 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 ZSCAN30Q86W11 494 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 FRMD1Q8N878 549 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 FAM71DQ8N9W8 422 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 OR14C36Q8NHC7 312 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 RAB7BQ96AH8 199 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 VOPP1Q96AW1 172 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 IMP4Q96G21 291 aaKnown RBP15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 C16orf45Q96MC5 204 aaPredicted RBP15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 KDM4CQ9H3R0 1056 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 CD93Q9NPY3 652 aa15.72■□□□□ 0.11
SLC6A4-205ENST00000579221 ZDBF2Q9HCK1 2354 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 GOLGA6L10A0A0M3HER8 536 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 LRRC72A6NJI9 287 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 PLK4O00444 970 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 TRAFD1O14545 582 aaPredicted RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 HTRA2O43464 458 aaPredicted RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 RHOBTB1O94844 696 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 ITGAVP06756 1048 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 ADRB3P13945 408 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 TIMP2P16035 220 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 CD86P42081 329 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 SUOXP51687 545 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 SKOR1P84550 965 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 LMNB2Q03252 620 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 SRSF5Q13243 272 aaKnown RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 SIM2Q14190 667 aaPredicted RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 PRPSAP1Q14558 356 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 OASLQ15646 514 aaKnown RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 ARMC12Q5T9G4 340 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 FAM160A2Q8N612 972 aaPredicted RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 PRELID2Q8N945 189 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 PDCD6IPQ8WUM4 868 aaKnown RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 MAGOHBQ96A72 148 aaKnown RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 CAPZA3Q96KX2 299 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 NSMCE3Q96MG7 304 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 SPATA13Q96N96 652 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 FCRL5Q96RD9 977 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 RBM15Q96T37 977 aaKnown RBP eCLIP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 AP1M1Q9BXS5 423 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 SERGEFQ9UGK8 458 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 RSPH14Q9UHP6 348 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 MBD1Q9UIS9 605 aaPredicted RBP15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 RAI2Q9Y5P3 530 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 R4GN57 208 aa15.71■□□□□ 0.11
SLC6A4-205ENST00000579221 CACNA1IQ9P0X4 2223 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3DA0A087WVF3 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3IA0A087WXS9 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3EA0A087X179 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3KA0A087X1G2 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TSPAN11A1L157 253 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3FA6NER0 549 aaPredicted RBP15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3LB9A6J9 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 OPHN1O60890 802 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 GCATO75600 419 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 SEMA4FO95754 770 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3HP0C7X1 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 NFKB1P19838 968 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 NFKBIAP25963 317 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 ACSL1P33121 698 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 CD68P34810 354 aaPredicted RBP15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 ACTN2P35609 894 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 RPL6Q02878 288 aaKnown RBP15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 ELF2Q15723 593 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 SLC14A2Q15849 920 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 SPDYCQ5MJ68 293 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 FAM182AQ5T1J6 154 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 PIP5KL1Q5T9C9 394 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 AGBL4Q5VU57 503 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3GQ6DHY5 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3CQ6IPX1 549 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 PARS2Q7L3T8 475 aaKnown RBP15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 LPCAT2Q7L5N7 544 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 GSTA5Q7RTV2 222 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 CREG2Q8IUH2 290 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 TBC1D3Q8IZP1 549 aaPredicted RBP15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 NDUFAF2Q8N183 169 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 CADM4Q8NFZ8 388 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 OR2T34Q8NGX1 318 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 ATL2Q8NHH9 583 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 CCDC110Q8TBZ0 833 aa15.7■□□□□ 0.1
SLC6A4-205ENST00000579221 FAM131CQ96AQ9 280 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms