RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 ZNF248Q8NDW4 579 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZNF548Q8NEK5 533 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 SLC20A1Q8WUM9 679 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 KCNE4Q8WWG9 221 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 FUBP1Q96AE4 644 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 VOPP1Q96AW1 172 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CENPTQ96BT3 561 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PGAP3Q96FM1 320 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 HIC2Q96JB3 615 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 VCPIP1Q96JH7 1222 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 FAM81BQ96LP2 452 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 C1orf74Q96LT6 269 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCDC114Q96M63 670 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZNF578Q96N58 590 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 SLC46A1Q96NT5 459 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 DEPDC7Q96QD5 511 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 HAPLN3Q96S86 360 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 IL12RB2Q99665 862 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 TUBGCP2Q9BSJ2 902 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ANP32EQ9BTT0 268 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 C2orf49Q9BVC5 232 aaPredicted RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 C1QTNF2Q9BXJ5 285 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZYG11BQ9C0D3 744 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 CLPBQ9H078 707 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 POLR1BQ9H9Y6 1135 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 NLRC4Q9NPP4 1024 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ASCL3Q9NQ33 180 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 RRN3Q9NYV6 651 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 TMEM63CQ9P1W3 806 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 ZNF212Q9UDV6 495 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 OR12D3Q9UGF7 316 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 DACH1Q9UI36 760 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 RABGEF1Q9UJ41 708 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 TPX2Q9ULW0 747 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 STAP1Q9ULZ2 295 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 PADI4Q9UM07 663 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 NOVA2Q9UNW9 492 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 TMA7Q9Y2S6 64 aaKnown RBP3.9□□□□□ -1.79
NUP85-209ENST00000578987 CCDC88CQ9P219 2028 aa3.9□□□□□ -1.79
NUP85-209ENST00000578987 TNRC6AQ8NDV7 1962 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 SMG1Q96Q15 3661 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 ITPR1Q14643 2758 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TEX51A0A1B0GUA7 166 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TTC24A2A3L6 582 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 EME2A4GXA9 379 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 H3BM21 787 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TK2O00142 265 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 EPHB6O15197 1021 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TSPAN6O43657 245 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 KDELR3O43731 214 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 AP1G1O43747 822 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 CREB3O43889 395 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 BUB1BO60566 1050 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 TM7SF2O76062 418 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 LRIG2O94898 1065 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TNFSF15O95150 251 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 POP4O95707 220 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 ANXA6P08133 673 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 PLEKP08567 350 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 CTSEP14091 401 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 HGFP14210 728 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 UCHL3P15374 230 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 CD46P15529 392 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 NME1P15531 152 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 TSHRP16473 764 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 RBMS1P29558 406 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 RFC1P35251 1148 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 ETFBP38117 255 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 RABIFP47224 123 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 SERPINB4P48594 390 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 DUSP3P51452 185 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 THOP1P52888 689 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 TMPRSS3P57727 454 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 BPIFB4P59827 614 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 PFN3P60673 137 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 POLR2FP61218 127 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 SNRPD1P62314 119 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 NOMO3P69849 1222 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 FMO1Q01740 532 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 PPARDQ03181 441 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 SLC20A2Q08357 652 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 INPP5AQ14642 412 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 POLD3Q15054 466 aaPredicted RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 CYTH1Q15438 398 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 NR0B2Q15466 257 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 WSCD2Q2TBF2 565 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 DPCR1Q3MIW9 517 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 KCTD16Q68DU8 428 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 KIAA1161Q6NSJ0 714 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 RETSATQ6NUM9 610 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 CAVIN1Q6NZI2 390 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 ZCCHC8Q6NZY4 707 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 WDR59Q6PJI9 974 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 KYAT3Q6YP21 454 aaKnown RBP3.89□□□□□ -1.79
NUP85-209ENST00000578987 CCDC81Q6ZN84 652 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 BNIPLQ7Z465 357 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 B3GNT8Q7Z7M8 397 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 JAMLQ86YT9 394 aa3.89□□□□□ -1.79
NUP85-209ENST00000578987 ZDHHC17Q8IUH5 632 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms