RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PAPSS2O95340 614 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 SERPINA6P08185 405 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 ATXN1LP0C7T5 689 aaKnown RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 COL6A2P12110 1019 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 CORO1AP31146 461 aaKnown RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 CDH4P55283 916 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 PLD1Q13393 1074 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 RCN2Q14257 317 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 PTAR1Q7Z6K3 402 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 TMCO2Q7Z6W1 182 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 BBS5Q8N3I7 341 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 FSTL5Q8N475 847 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 OR52K2Q8NGK3 314 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 RDH11Q8TC12 318 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 MAGEC3Q8TD91 643 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 PLD4Q96BZ4 506 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF599Q96NL3 588 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 MIPEPQ99797 713 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 SPON2Q9BUD6 331 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 GKN1Q9NS71 199 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 OXSMQ9NWU1 459 aa14.17□□□□□ -0.14
VPS33B-208ENST00000574755 APOBEC2Q9Y235 224 aaKnown RBP14.17□□□□□ -0.14
VPS33B-208ENST00000574755 CAPN14A8MX76 684 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 H2AFYO75367 372 aaKnown RBP14.16□□□□□ -0.14
VPS33B-208ENST00000574755 STC2O76061 302 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 ENO1P06733 434 aaKnown RBP14.16□□□□□ -0.14
VPS33B-208ENST00000574755 IRF1P10914 325 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 HOXD9P28356 352 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-208ENST00000574755 CRABP2P29373 138 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 PRAMEP78395 509 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 LRRC8EQ6NSJ5 796 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 CNSTQ6PJW8 725 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 ZYG11AQ6WRX3 759 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 FAM13CQ8NE31 585 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 OR6P1Q8NGX9 317 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 AGAP11Q8TF27 550 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 PRICKLE1Q96MT3 831 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-208ENST00000574755 TLE6Q9H808 572 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 ATP11BQ9Y2G3 1177 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 YIPF1Q9Y548 306 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 ACTL7AQ9Y615 435 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 MROH6A6NGR9 719 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 TMEM114B3SHH9 223 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 CCL22O00626 93 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 KLKB1P03952 638 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 SERPINF2P08697 491 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 TAS2R39P59534 338 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 POU4F1Q01851 419 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 GALNT3Q14435 633 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 VEPH1Q14D04 833 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 LIPMQ5VYY2 423 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 TPGS2Q68CL5 300 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 RINLQ6ZS11 566 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 MAVSQ7Z434 540 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 TREML1Q86YW5 311 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 SPATA6LQ8N4H0 392 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 TMEM151AQ8N4L1 468 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF781Q8N8C0 355 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 BLOC1S5Q8TDH9 187 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 NXNL1Q96CM4 212 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 MYRFLQ96LU7 910 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF558Q96NG5 402 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 NDNQ99608 321 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 CADM1Q9BY67 442 aaKnown RBP14.16□□□□□ -0.14
VPS33B-208ENST00000574755 HSFX1Q9UBD0 423 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 XPR1Q9UBH6 696 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 COL4A6Q14031 1691 aa14.16□□□□□ -0.14
VPS33B-208ENST00000574755 LAMA2P24043 3122 aaKnown RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 C2orf78A6NCI8 922 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 PRRG1O14668 218 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 CLDN11O75508 207 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 KLHL2O95198 593 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 SBK3P0C264 359 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 HLA-DPA1P20036 260 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 DNAJB1P25685 340 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 CPA2P48052 419 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 OXCT1P55809 520 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 DSG1Q02413 1049 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 USP4Q13107 963 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 E2F5Q15329 346 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TBCCQ15814 346 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 ZNF789Q5FWF6 425 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 CFAP157Q5JU67 520 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 RBM20Q5T481 1227 aaKnown RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 CILP2Q8IUL8 1156 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 AGR3Q8TD06 166 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 STYXQ8WUJ0 223 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TOP1MTQ969P6 601 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 HDAC10Q969S8 669 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 MCUR1Q96AQ8 359 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 FEM1CQ96JP0 617 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 OMDQ99983 421 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 CINPQ9BW66 212 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 CCDC106Q9BWC9 280 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 GATA5Q9BWX5 397 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 UNKQ9C0B0 810 aaKnown RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 RNF38Q9H0F5 515 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 RETREG1Q9H6L5 497 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TMEM39AQ9NV64 488 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms