RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 FIBINQ8TAL6 211 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 WFDC5Q8TCV5 224 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SH3RF2Q8TEC5 729 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 DDI1Q8WTU0 396 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 PEX13Q92968 403 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ISL2Q96A47 359 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TCEAL4Q96EI5 215 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 IFT43Q96FT9 208 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SEC16BQ96JE7 1060 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 CABS1Q96KC9 395 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 NSMCE3Q96MG7 304 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ZNF778Q96MU6 729 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TGS1Q96RS0 853 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TRIB3Q96RU7 358 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SRPK1Q96SB4 655 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 AGAP2Q99490 1192 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 PAIP2Q9BPZ3 127 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 FEM1AQ9BSK4 669 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 MCMBPQ9BTE3 642 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 IQCGQ9H095 443 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 FAM107BQ9H098 131 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 VPS11Q9H270 941 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SCUBE2Q9NQ36 999 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 IARS2Q9NSE4 1012 aaKnown RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ZDHHC7Q9NXF8 308 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 IL1RAPL1Q9NZN1 696 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 KIAA1522Q9P206 1035 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 SLC17A7Q9P2U7 560 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 LHX3Q9UBR4 397 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 DCDC2Q9UHG0 476 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 RIMKLBQ9ULI2 386 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 GRID1Q9ULK0 1009 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 PLLPQ9Y342 182 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ARIH1Q9Y4X5 557 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 ACTL7AQ9Y615 435 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 MUC22E2RYF6 1773 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 COL4A3Q01955 1670 aa6.2□□□□□ -1.42
TRAPPC1-204ENST00000571947 TICRRQ7Z2Z1 1910 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CEP290O15078 2479 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 BRCA2P51587 3418 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CXorf51AA0A1B0GTR3 108 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CCDC78A2IDD5 438 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 MROH6A6NGR9 719 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 ZNF197O14709 1029 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 TPP1O14773 563 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SLC7A4O43246 635 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 LDB2O43679 373 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 GLRA3O75311 464 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 GJB3O75712 270 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 TMCC1O94876 653 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 VAPBO95292 243 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 PAPLNO95428 1278 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 ALDOAP04075 364 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CYBBP04839 570 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 MPOP05164 745 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CA3P07451 260 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 GSTA1P08263 222 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 ARNTP27540 789 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 TIE1P35590 1138 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 AVPR1AP37288 418 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SERPINB4P48594 390 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 POLD2P49005 469 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SERPINB8P50452 374 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SCNN1BP51168 640 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 NTHL1P78549 312 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 PDE1BQ01064 536 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 ACVR1Q04771 509 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 LMAN2Q12907 356 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SLC12A1Q13621 1099 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CDH18Q13634 790 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 THOC5Q13769 683 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 PDE1CQ14123 709 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SHHQ15465 462 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SMAD1Q15797 465 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CNGA3Q16281 694 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 DBN1Q16643 649 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 UGP2Q16851 508 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 INSCQ1MX18 579 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SLC5A9Q2M3M2 681 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 GKAP1Q5VSY0 366 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 FAM109BQ6ICB4 259 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 RETSATQ6NUM9 610 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 NCEH1Q6PIU2 408 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 ELMSAN1Q6PJG2 1045 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 C6orf89Q6UWU4 347 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 KYAT3Q6YP21 454 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CDHR3Q6ZTQ4 885 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 MICALCLQ6ZW33 695 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 SRLQ86TD4 932 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 METTL3Q86U44 580 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 ZC3HC1Q86WB0 502 aaKnown RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 MFN1Q8IWA4 741 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 TRIM42Q8IWZ5 723 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CACNA2D3Q8IZS8 1091 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 APCDD1Q8J025 514 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 DCLK2Q8N568 766 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 CCDC197Q8NCU1 140 aa6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 C2CD4AQ8NCU7 369 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC1-204ENST00000571947 GABPB2Q8TAK5 448 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms