RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 STXBP5Q5T5C0 1151 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 LPCAT4Q643R3 524 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 RAP1GAP2Q684P5 730 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 NET1Q7Z628 596 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SDCCAG8Q86SQ7 713 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SNX32Q86XE0 403 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 MAB21L3Q8N8X9 362 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ZFPM2Q8WW38 1151 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CMTM5Q96DZ9 223 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 RHOJQ9H4E5 214 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 OXSMQ9NWU1 459 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 GMIPQ9P107 970 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ADAM28Q9UKQ2 775 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 Q9Y3F1 56 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 KCTD3Q9Y597 815 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 DPPA5A6NC42 116 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 MATN3O15232 486 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 RECKO95980 971 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SKIP12755 728 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 HOXC8P31273 242 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 HOXC13P31276 330 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 GJA8P48165 433 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CDK7P50613 346 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 PKNOX1P55347 436 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ACTR3P61158 418 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 DSC2Q02487 901 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 KLC1Q07866 573 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 KLF10Q13118 480 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SLC12A1Q13621 1099 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 TRMT5Q32P41 509 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 LSM12Q3MHD2 195 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SEL1L3Q68CR1 1132 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 DENND5AQ6IQ26 1287 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 RGMBQ6NW40 437 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CENPLQ8N0S6 344 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 PSMG2Q969U7 264 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 HMCESQ96FZ2 354 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 MRGPRX2Q96LB1 330 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 GPR22Q99680 433 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SEPT5Q99719 369 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 KIFC1Q9BW19 673 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 DNAJC28Q9NX36 388 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ZMAT5Q9UDW3 170 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ABT1Q9ULW3 272 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CRYL1Q9Y2S2 319 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 TLL2Q9Y6L7 1015 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SHROOM3Q8TF72 1996 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 EME2A4GXA9 379 aaPredicted RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 DLX3O60479 287 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 TADA2AO75478 443 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SBK3P0C264 359 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 CYBAP13498 195 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 ITGAXP20702 1163 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 ARNTP27540 789 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 CSE1LP55060 971 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 MGAT3Q09327 533 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 GRIK3Q13003 919 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 EIF2B5Q13144 721 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 BLMHQ13867 455 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SH2D4BQ5SQS7 431 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 PIK3R6Q5UE93 754 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 LRRC8EQ6NSJ5 796 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 EPGNQ6UW88 154 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 NPAS4Q8IUM7 802 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 FAM193BQ96PV7 902 aaPredicted RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 CENPOQ9BU64 300 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 OSBPL2Q9H1P3 480 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SP110Q9HB58 689 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 ARHGEF38Q9NXL2 777 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SPATA7Q9P0W8 599 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 CDH22Q9UJ99 828 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 FBXO5Q9UKT4 447 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 ANGPTL2Q9UKU9 493 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 LZTS1Q9Y250 596 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 ACTL7AQ9Y615 435 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 STX16-NPEPL1H3BU86 382 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 TXNDC9O14530 226 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SCAMP3O14828 347 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 PRKAR2AP13861 404 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 RPL14P50914 215 aaKnown RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 GEMP55040 296 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 RAB10P61026 200 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 TBCCQ15814 346 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 MGAT5BQ3V5L5 792 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 FSCBQ5H9T9 825 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 LIPMQ5VYY2 423 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 NAIF1Q69YI7 327 aaPredicted RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 NEPROQ6NW34 567 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 GLB1LQ6UWU2 654 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 CLEC14AQ86T13 490 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 CFAP52Q8N1V2 620 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 HEXDCQ8WVB3 486 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 IRGQQ8WZA9 623 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 TBC1D20Q96BZ9 403 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 RPRD1AQ96P16 312 aaPredicted RBP8.84□□□□□ -0.99
LINC00558-201ENST00000569422 FCRL5Q96RD9 977 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 SLC39A3Q9BRY0 314 aa8.84□□□□□ -0.99
LINC00558-201ENST00000569422 BATF3Q9NR55 127 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms