RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 A0A087X1B8 175 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 FAM189A1O60320 539 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 PRKAA2P54646 552 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 CCL23P55773 120 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 ANKS6Q68DC2 871 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 NAIF1Q69YI7 327 aaPredicted RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 ZBTB49Q6ZSB9 765 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 DHDDSQ86SQ9 333 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 TREML1Q86YW5 311 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 PLD6Q8N2A8 252 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 RSPH1Q8WYR4 309 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 THUMPD3Q9BV44 507 aaKnown RBP11.69□□□□□ -0.54
CDH1-210ENST00000566612 CATSPERZQ9NTU4 200 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 SLC7A8Q9UHI5 535 aa11.69□□□□□ -0.54
CDH1-210ENST00000566612 TMEM114B3SHH9 223 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 C9JVG2 144 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 ALDOAP04075 364 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 CCNCP24863 283 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 CXCR3P49682 368 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SH3BGRP55822 239 aaPredicted RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 CDK18Q07002 472 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 PPIDQ08752 370 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 PTPRNQ16849 979 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SLC9B1Q4ZJI4 515 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 MARCH8Q5T0T0 291 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 GPR158Q5T848 1215 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 CASP10Q92851 521 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 TSPAN18Q96SJ8 248 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 CLPBQ9H078 707 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 OLA1Q9NTK5 396 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 RIC8BQ9NVN3 520 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 WWOXQ9NZC7 414 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SLC2A6Q9UGQ3 507 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 RAD54BQ9Y620 910 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 MATN3O15232 486 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 RTN3O95197 1032 aaPredicted RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 AFF1P51825 1210 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 CNSTQ6PJW8 725 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 GK5Q6ZS86 529 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 CLEC4FQ8N1N0 589 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SMG8Q8ND04 991 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 FAM156AQ8NDB6 213 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SLC7A6OSQ96CW6 309 aaPredicted RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 TMEM209Q96SK2 561 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 ACOX2Q99424 681 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SEPHS2Q99611 448 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 PNPLA8Q9NP80 782 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 EIF2B3Q9NR50 452 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 AK5Q9Y6K8 562 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 OR51F1A6NGY5 319 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 HIST1H2AGP0C0S8 130 aaPredicted RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 HIST1H2ADP20671 130 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 SP100P23497 879 aaPredicted RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 SCNN1AP37088 669 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 CLCN5P51795 746 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 PURAQ00577 322 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 PLD1Q13393 1074 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 NR6A1Q15406 480 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 LSM12Q3MHD2 195 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 ELMOD1Q8N336 334 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 DCBLD1Q8N8Z6 715 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 HMCESQ96FZ2 354 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 VPS50Q96JG6 964 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 HIST1H2AHQ96KK5 128 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 HIST1H2AJQ99878 128 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 H2AFJQ9BTM1 129 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 NMRK2Q9NPI5 230 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 RPL26L1Q9UNX3 145 aaKnown RBP11.68□□□□□ -0.54
CDH1-210ENST00000566612 PCDHB12Q9Y5F1 795 aa11.68□□□□□ -0.54
CDH1-210ENST00000566612 TCRBV5S1A1TA0A578 114 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 INPP4BO15327 924 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CYBBP04839 570 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CCR10P46092 362 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 PSME3P61289 254 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 DDX39BQ13838 428 aaKnown RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 LDLRAD1Q5T700 205 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CLEC6AQ6EIG7 209 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 HEXDCQ8WVB3 486 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 SNX19Q92543 992 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 NTAN1Q96AB6 310 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 ZNF778Q96MU6 729 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 FCRL3Q96P31 734 aaPredicted RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 ECSITQ9BQ95 431 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
CDH1-210ENST00000566612 ADNPQ9H2P0 1102 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 MRGBPQ9NV56 204 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 ZMYM5Q9UJ78 669 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CDH22Q9UJ99 828 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 CLPTM1O96005 669 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 PSMC3P17980 439 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 LRPAP1P30533 357 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 NNMTP40261 264 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 INHBEP58166 350 aa11.67□□□□□ -0.54
CDH1-210ENST00000566612 TMED1Q13445 227 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms