RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 PCDHGA1Q9Y5H4 931 aa14.9□□□□□ -0.02
USB1-210ENST00000565151 ZSCAN5CA6NGD5 496 aaPredicted RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 MUSKO15146 869 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 CASC3O15234 703 aaKnown RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 FGF10O15520 208 aaPredicted RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 TSPAN6O43657 245 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 PRAMEF11O60813 436 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 MMP20O60882 483 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 NEBLO76041 1014 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 ERCC2P18074 760 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 IGFALSP35858 605 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 TPI1P60174 286 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 PFN3P60673 137 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 RHOAP61586 193 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 CYP4F3Q08477 520 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 EIF2B5Q13144 721 aaKnown RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 DPYSQ14117 519 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 INAVAQ3KP66 663 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 PTAR1Q7Z6K3 402 aaPredicted RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 ZNF354CQ86Y25 554 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 TSEN2Q8NCE0 465 aaKnown RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 FNIP1Q8TF40 1166 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 ZNF653Q96CK0 615 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 GDAP1L1Q96MZ0 367 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 OSBPL1AQ9BXW6 950 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 TCEAL2Q9H3H9 227 aaPredicted RBP14.89□□□□□ -0.03
USB1-210ENST00000565151 CATSPERBQ9H7T0 1116 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 MYO1AQ9UBC5 1043 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 NENFQ9UMX5 172 aa14.89□□□□□ -0.03
USB1-210ENST00000565151 SPTY2D1-AS1A0A0U1RR47 76 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 TSPAN11A1L157 253 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 ANKRD62A6NC57 917 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 A6NNZ2 444 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 EEF2KO00418 725 aaKnown RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 FFAR2O15552 330 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 MAGEC1O60732 1142 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 RFPL3O75679 317 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 SERPINC1P01008 464 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 PRKCGP05129 697 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 CKMT2P17540 419 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 ACP1P24666 158 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 NDST2P52849 883 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 INSM1Q01101 510 aaPredicted RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 CCDC15Q0P6D6 951 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 ZNF211Q13398 564 aaPredicted RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 RFX8Q6ZV50 586 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 TTC7BQ86TV6 843 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 TP53I13Q8NBR0 393 aaPredicted RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 OR4C6Q8NH72 309 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 CASKIN2Q8WXE0 1202 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 ASB12Q8WXK4 309 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 RAB7BQ96AH8 199 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 ARHGEF26Q96DR7 871 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 WRAP53Q9BUR4 548 aaKnown RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 CPEB1Q9BZB8 566 aaKnown RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 CCDC86Q9H6F5 360 aaKnown RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 DKK3Q9UBP4 350 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 UBA2Q9UBT2 640 aaPredicted RBP14.88□□□□□ -0.03
USB1-210ENST00000565151 COQ6Q9Y2Z9 468 aa14.88□□□□□ -0.03
USB1-210ENST00000565151 A0A087X0T9 212 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 TTC24A2A3L6 582 aaPredicted RBP14.87□□□□□ -0.03
USB1-210ENST00000565151 IGSF6O95976 241 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 PEX11BO96011 259 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 FAM228BP0C875 321 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 HTR7P34969 479 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 TARDBPQ13148 414 aaKnown RBP eCLIP14.87□□□□□ -0.03
USB1-210ENST00000565151 SMTNL2Q2TAL5 461 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 PPP6R3Q5H9R7 873 aaPredicted RBP14.87□□□□□ -0.03
USB1-210ENST00000565151 HES3Q5TGS1 186 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 KCTD16Q68DU8 428 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 TMPRSS12Q86WS5 348 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 CAMK1DQ8IU85 385 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 GALNT15Q8N3T1 639 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 CPLX3Q8WVH0 158 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 THAP2Q9H0W7 228 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 DNAJC28Q9NX36 388 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 RAXQ9Y2V3 346 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 GPSM3Q9Y4H4 160 aa14.87□□□□□ -0.03
USB1-210ENST00000565151 SMG1Q96Q15 3661 aaKnown RBP14.87□□□□□ -0.03
USB1-210ENST00000565151 ZFC3H1O60293 1989 aaKnown RBP14.86□□□□□ -0.03
USB1-210ENST00000565151 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 K7ESM1 405 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 CSF2P04141 144 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 GYPCP04921 128 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 C1SP09871 688 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
USB1-210ENST00000565151 GM2AP17900 193 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 AMPD1P23109 780 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 TMEM52BQ4KMG9 183 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 VPS36Q86VN1 386 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 RBFAQ8N0V3 343 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 PGBD5Q8N414 524 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 RFFLQ8WZ73 363 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 SUV39H2Q9H5I1 410 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 PCDH12Q9NPG4 1184 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 DKK4Q9UBT3 224 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 CAPN11Q9UMQ6 739 aa14.86□□□□□ -0.03
USB1-210ENST00000565151 NEMP1O14524 444 aa14.85□□□□□ -0.03
USB1-210ENST00000565151 SCAMP1O15126 338 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms