RNA–Protein interactions for RNA: ENST00000559491.1

RNF31-215, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-215	ENST00000559491	CS	O75390	466 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	GCAT	O75600	419 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	C1QL1	O75973	258 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	POP4	O95707	220 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	CELA2B	P08218	269 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	JUND	P17535	347 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	STAT1	P42224	750 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	NSF	P46459	744 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	RABIF	P47224	123 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	GSC	P56915	257 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	PFN3	P60673	137 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	SNRPD1	P62314	119 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	OGDH	Q02218	1023 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	SGCG	Q13326	291 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	NR1I3	Q14994	352 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	TBC1D25	Q3MII6	688 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	FILIP1L	Q4L180	1135 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	HS1BP3	Q53T59	392 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	PERM1	Q5SV97	790 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	SCYL2	Q6P3W7	929 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	GUSBP11	Q6P575	273 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	GDPD4	Q6W3E5	623 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	LRRC69	Q6ZNQ3	347 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	MON1B	Q7L1V2	547 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	PARG	Q86W56	976 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	ZNF354C	Q86Y25	554 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	DNAAF5	Q86Y56	855 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	PHF13	Q86YI8	300 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	DCP2	Q8IU60	420 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	SPACA3	Q8IXA5	215 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	FAM181A	Q8N9Y4	354 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	C3orf20	Q8ND61	904 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	LMX1A	Q8TE12	382 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	NTAN1	Q96AB6	310 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	HMCES	Q96FZ2	354 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	EXOC2	Q96KP1	924 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	FCRL3	Q96P31	734 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	WRAP53	Q9BUR4	548 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	SELENOO	Q9BVL4	669 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	TTYH3	Q9C0H2	523 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	TMEM51	Q9NW97	253 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	GPATCH2L	Q9NWQ4	482 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	LHX3	Q9UBR4	397 aa		11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	IPO11	Q9UI26	975 aa	Known RBP	11.64	□□□□□ -0.55
RNF31-215	ENST00000559491	GCN1	Q92616	2671 aa	Known RBP	11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	MGA	Q8IWI9	3026 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	UNC13C	Q8NB66	2214 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491		A0A1W2PQC6	194 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	CPED1	A4D0V7	1026 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	NEMP2	A6NFY4	417 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	SIGLEC16	A6NMB1	481 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	RASA4B	C9J798	803 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	RASA4	O43374	803 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	CREB3	O43889	395 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	PIGN	O95427	931 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	ALPPL2	P10696	532 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	TIMP2	P16035	220 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	EPHB2	P29323	1055 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	ACTN2	P35609	894 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	ETFB	P38117	255 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	GABRE	P78334	506 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	TLE3	Q04726	772 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	CYTH1	Q15438	398 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	TCEA2	Q15560	299 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	PPP1R15B	Q5SWA1	713 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	TRIM72	Q6ZMU5	477 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	SLFN11	Q7Z7L1	901 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	TTC7B	Q86TV6	843 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	VSTM4	Q8IW00	320 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	RTL3	Q8N8U3	475 aa	Known RBP	11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	FAM174A	Q8TBP5	190 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	RAB7B	Q96AH8	199 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	MCEE	Q96PE7	176 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	CLPB	Q9H078	707 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	SEPT11	Q9NVA2	429 aa	Known RBP	11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	IMPACT	Q9P2X3	320 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	FZD10	Q9ULW2	581 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	HPCAL4	Q9UM19	191 aa		11.63	□□□□□ -0.55
RNF31-215	ENST00000559491	CXorf51A	A0A1B0GTR3	108 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491		H3BM21	787 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	RRP8	O43159	456 aa	Known RBP	11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	PRKCG	P05129	697 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	GP1BA	P07359	652 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	TPM2	P07951	284 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	ADK	P55263	362 aa	Known RBP	11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	GEMIN4	P57678	1058 aa	Known RBP	11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	RHOA	P61586	193 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	SERINC3	Q13530	473 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	IRF4	Q15306	451 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	CA9	Q16790	459 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	PRRT3	Q5FWE3	981 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	FKBP15	Q5T1M5	1219 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	KCTD16	Q68DU8	428 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	PCSK4	Q6UW60	755 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	ZSWIM9	Q86XI8	627 aa		11.62	□□□□□ -0.55
RNF31-215	ENST00000559491	SLC35F3	Q8IY50	421 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms