RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 UGT2B4P06133 528 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 DCNP07585 359 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 CTSLP07711 333 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 GOLGA6DP0CG33 693 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 COL9A1P20849 921 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 IVDP26440 423 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 SERPINA4P29622 427 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 RPL21P46778 160 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 RPS9P46781 194 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 FOXK1P85037 733 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 GUCY2DQ02846 1103 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 BCL2L1Q07817 233 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 MPP3Q13368 585 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 SEMA5AQ13591 1074 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 DSG2Q14126 1118 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 SPARCL1Q14515 664 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 ELAVL3Q14576 367 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 GRM3Q14832 879 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 DUPD1Q68J44 220 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 KIAA1211LQ6NV74 962 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 GDPD4Q6W3E5 623 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 PAF1Q8N7H5 531 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 IPMKQ8NFU5 416 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 PDCD6IPQ8WUM4 868 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 CLDN23Q96B33 292 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 TADA1Q96BN2 335 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 SNF8Q96H20 258 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 MRGPRX2Q96LB1 330 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 PPP1R2P1Q96PQ5 205 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 TUBGCP5Q96RT8 1024 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 FAM129BQ96TA1 746 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 MLPHQ9BV36 600 aaPredicted RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 FSD1LQ9BXM9 530 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 VPS45Q9NRW7 570 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 GOLGA6AQ9NYA3 693 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 DMGDHQ9UI17 866 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
CUX1-216ENST00000558469 RAI2Q9Y5P3 530 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 WASF2Q9Y6W5 498 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 CEP192Q8TEP8 1941 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 EML5Q05BV3 1969 aa9.71□□□□□ -0.86
CUX1-216ENST00000558469 DOCK9Q9BZ29 2069 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TCRBV7S3A2A0A539 114 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 ESYT3A0FGR9 886 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 ERI2A8K979 691 aaKnown RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 KPNA3O00505 521 aaPredicted RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 DNALI1O14645 258 aaPredicted RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 PI15O43692 258 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 RNASEH1O60930 286 aaKnown RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 AP2A1O95782 977 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 AGTP01019 485 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 IL1BP01584 269 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 PRNPP04156 253 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 APRTP07741 180 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 CA4P22748 312 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TNNT3P45378 269 aaPredicted RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 PSMD8P48556 350 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 COPAP53621 1224 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 WNT3AP56704 352 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TUBB4BP68371 445 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TRAF2Q12933 501 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 OLIG2Q13516 323 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 GAS6Q14393 721 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TRADDQ15628 312 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 SLC14A2Q15849 920 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 CRY1Q16526 586 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 POM121L1PQ3SYA9 428 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 KCTD11Q693B1 232 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 CWF19L1Q69YN2 538 aaKnown RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 KDELC1Q6UW63 502 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 SYT13Q7L8C5 426 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 PCGF5Q86SE9 256 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 DSG4Q86SJ6 1040 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 CACUL1Q86Y37 369 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 MMAAQ8IVH4 418 aaKnown RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 PPIL6Q8IXY8 311 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TMIEQ8NEW7 156 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 OR2T3Q8NH03 318 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 PIP4K2CQ8TBX8 421 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 CPT1BQ92523 772 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 VOPP1Q96AW1 172 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 IFT43Q96FT9 208 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 LRIG1Q96JA1 1093 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 ZNF641Q96N77 438 aaPredicted RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 KLHL32Q96NJ5 620 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 TBL1YQ9BQ87 522 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 FICDQ9BVA6 458 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 SLC6A17Q9H1V8 727 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 RSPH9Q9H1X1 276 aaPredicted RBP9.7□□□□□ -0.86
CUX1-216ENST00000558469 SUV39H2Q9H5I1 410 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 LRRC40Q9H9A6 602 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 EPB41L5Q9HCM4 733 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 C2orf42Q9NWW7 574 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.7□□□□□ -0.86
CUX1-216ENST00000558469 ANAPC5Q9UJX4 755 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 SARDHQ9UL12 918 aa9.7□□□□□ -0.86
CUX1-216ENST00000558469 PPM1HQ9ULR3 514 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms