RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 DNAJB2P25686 324 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 CD151P48509 253 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 PLK1P53350 603 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 RAB10P61026 200 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 SERINC3Q13530 473 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 SLC12A1Q13621 1099 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 FRG1Q14331 258 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 CSHL1Q14406 222 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ZNF235Q14590 738 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 KRT72Q14CN4 511 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 IL31Q6EBC2 164 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 LRRC8EQ6NSJ5 796 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 C16orf59Q7L2K0 433 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 TDRD5Q8NAT2 981 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 OR13J1Q8NGT2 312 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 HDAC10Q969S8 669 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 FAM161BQ96MY7 647 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 OLA1Q9NTK5 396 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 CRYL1Q9Y2S2 319 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ACOT9Q9Y305 439 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 A0A0U1RQS6 177 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 TMEM233B4DJY2 109 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 F5H5T6 163 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 ZNF195O14628 629 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 DCXO43602 365 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 FKTNO75072 461 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 SERPINA6P08185 405 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PAMP19021 973 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 CCND1P24385 295 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PGM1P36871 562 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 RGRP47804 291 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 HARS2P49590 506 aaKnown RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PLD1Q13393 1074 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PTPRRQ15256 657 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PREPLQ4J6C6 727 aaPredicted RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 SPDYAQ5MJ70 313 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 TSTD2Q5T7W7 516 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PIM3Q86V86 326 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 C2CD4AQ8NCU7 369 aaPredicted RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 DTX3LQ8TDB6 740 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 MARK4Q96L34 752 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 OR52B2Q96RD2 323 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 CYP2S1Q96SQ9 504 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 THTPAQ9BU02 230 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 TLE6Q9H808 572 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 OXSMQ9NWU1 459 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 TAGLN3Q9UI15 199 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 FNDC3AQ9Y2H6 1198 aaKnown RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 PCDHB12Q9Y5F1 795 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 MIA3Q5JRA6 1907 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 HEATR9A2RTY3 570 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 C2orf78A6NCI8 922 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 SPECC1L-ADORA2AF8WAN1 911 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 COCHO43405 550 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 DLX3O60479 287 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 KRT36O76013 467 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 PIGNO95427 931 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 KLKB1P03952 638 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 JUNP05412 331 aaKnown RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 ARSAP15289 507 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 ATP5C1P36542 298 aaKnown RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 SLC12A2P55011 1212 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 ARL13AQ5H913 290 aaPredicted RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 RABGAP1LQ5R372 815 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 KIAA0930Q6ICG6 404 aaPredicted RBP10.65□□□□□ -0.7
TPM1-210ENST00000558264 CNTN4Q8IWV2 1026 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 CRIPAKQ8N1N5 446 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 OR13C4Q8NGS5 318 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 HEXDCQ8WVB3 486 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 NSMCE3Q96MG7 304 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 CDH19Q9H159 772 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
TPM1-210ENST00000558264 DRGXA6NNA5 263 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 H7C4K7 107 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 SORBS2O94875 1100 aaKnown RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 ATXN1LP0C7T5 689 aaKnown RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 SPATA31D3P0C874 917 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 COL6A1P12109 1028 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 EPHA3P29320 983 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 PRAMEP78395 509 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 UGP2Q16851 508 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 ACSBG2Q5FVE4 666 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 ZYG11AQ6WRX3 759 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 SPATA31D4Q6ZUB0 917 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 OR6Y1Q8NGX8 325 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 MAGEC3Q8TD91 643 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 IFT43Q96FT9 208 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 DNAJC1Q96KC8 554 aaKnown RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 SPATA17Q96L03 361 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 TBATAQ96M53 351 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 PRICKLE1Q96MT3 831 aaPredicted RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 NUF2Q9BZD4 464 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 RNF38Q9H0F5 515 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 RNF208Q9H0X6 261 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 RNPEPL1Q9HAU8 725 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 NSMCE4AQ9NXX6 385 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms