RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 FBXL12Q9NXK8 326 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 SERGEFQ9UGK8 458 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 CYP8B1Q9UNU6 501 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 NCKAP1Q9Y2A7 1128 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 RAI2Q9Y5P3 530 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 MRFAP1Q9Y605 127 aa14.19□□□□□ -0.14
VIPAS39-208ENST00000556412 CCDC188H7C350 402 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 GCATO75600 419 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 ECEL1O95672 775 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 GAS8O95995 478 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 XPAP23025 273 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 TERF1P54274 439 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 SKOR1P84550 965 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 ZBTB16Q05516 673 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 CNTN1Q12860 1018 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 TRAF2Q12933 501 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 P3H1Q32P28 736 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 ZNF805Q5CZA5 627 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 RALGPS1Q5JS13 557 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 ALG1LQ6GMV1 187 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 FBXL19Q6PCT2 694 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 PRPF39Q86UA1 669 aaKnown RBP14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 GRK7Q8WTQ7 553 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 RTP4Q96DX8 246 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 ZNF641Q96N77 438 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 KRT12Q99456 494 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 EBF1Q9UH73 591 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 PCDHB9Q9Y5E1 797 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 C16orf96A6NNT2 1141 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 METTL18O95568 372 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 MMP2P08253 660 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 CA4P22748 312 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 ITGB7P26010 798 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 TPMTP51580 245 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 IHHQ14623 411 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 PPP1R7Q15435 360 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 SYCP2LQ5T4T6 812 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 PARS2Q7L3T8 475 aaKnown RBP14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 IPMKQ8NFU5 416 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 VOPP1Q96AW1 172 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 FCRL5Q96RD9 977 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 PAK5Q9P286 719 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 FAM153AQ9UHL3 310 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 FEZ2Q9UHY8 353 aaPredicted RBP14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 FBXO4Q9UKT5 387 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 SCML1Q9UN30 329 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 CHKBQ9Y259 395 aa14.18□□□□□ -0.14
VIPAS39-208ENST00000556412 FAM47DPA6NHR8 397 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 CPP00450 1065 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 KRT14P02533 472 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 RPL22P35268 128 aaKnown RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 P2RY2P41231 377 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 TNNT3P45378 269 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 NEK3P51956 506 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 EPHB1P54762 984 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 DR1Q01658 176 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 SFSWAPQ12872 951 aaKnown RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 TUBB2AQ13885 445 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 PARP6Q2NL67 630 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 ARMC12Q5T9G4 340 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 ERN2Q76MJ5 926 aaKnown RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 TTC7BQ86TV6 843 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 FAM160A2Q8N612 972 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 LPCAT1Q8NF37 534 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 IFT43Q96FT9 208 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 OXNAD1Q96HP4 312 aaPredicted RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 TUBB2BQ9BVA1 445 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 FSD1LQ9BXM9 530 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 TDRD1Q9BXT4 1180 aaKnown RBP14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 NEUROG2Q9H2A3 272 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 RAB6BQ9NRW1 208 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 NCOR1O75376 2440 aa14.17□□□□□ -0.14
VIPAS39-208ENST00000556412 PRR23AA6NEV1 266 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 E7EVH7 732 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 TRAFD1O14545 582 aaPredicted RBP14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 SOCS5O75159 536 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 ZNF217O75362 1048 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 ANXA9O76027 345 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 PRKCGP05129 697 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 TDGF1P13385 188 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 DRD3P35462 400 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 LMAN1P49257 510 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 BASP1P80723 227 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 MRPS25P82663 173 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 USP39Q53GS9 565 aaKnown RBP14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 ZSWIM9Q86XI8 627 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 FRMD1Q8N878 549 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 OR14C36Q8NHC7 312 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 SPACA7Q96KW9 195 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 PCDH9Q9HC56 1237 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 ITM2CQ9NQX7 267 aa14.16□□□□□ -0.14
VIPAS39-208ENST00000556412 NEMP1O14524 444 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 PGLSO95336 258 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 PDHA1P08559 390 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 SP9P0CG40 484 aa14.15□□□□□ -0.14
VIPAS39-208ENST00000556412 ADRB3P13945 408 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms