RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TMEM196	Q5HYL7	178 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	SEPT14	Q6ZU15	432 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	ADGRF4	Q8IZF3	695 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	ABHD5	Q8WTS1	349 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	SCFD2	Q8WU76	684 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	RILPL2	Q969X0	211 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	C18orf8	Q96DM3	657 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	TTC14	Q96N46	770 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	EIF2A	Q9BY44	585 aa	Known RBP	5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	THEG	Q9P2T0	379 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	MTCH2	Q9Y6C9	303 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	PLXNA1	Q9UIW2	1896 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	CCDC171	Q6TFL3	1326 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	CHD7	Q9P2D1	2997 aa		5.7	□□□□□ -1.5
PSMC6-208	ENST00000554956	MCM3AP	O60318	1980 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956		H3BNC9	293 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	NBN	O60934	754 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	MMP3	P08254	477 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	SUPT20HL2	P0C7V6	817 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	CDK4	P11802	303 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	EEF1G	P26641	437 aa	Known RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	SLC5A2	P31639	672 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	PPM1A	P35813	382 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZNF81	P51508	661 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	SSBP2	P81877	361 aa	Predicted RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	CCDC15	Q0P6D6	951 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	BFSP2	Q13515	415 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	CDC37	Q16543	378 aa	Predicted RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	MPEG1	Q2M385	716 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	SLC5A9	Q2M3M2	681 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	TRIM71	Q2Q1W2	868 aa	Known RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	TMTC4	Q5T4D3	741 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	NFRKB	Q6P4R8	1299 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	USP17L6P	Q6QN14	398 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	CWC27	Q6UX04	472 aa	Known RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	MFSD6	Q6ZSS7	791 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	CHST3	Q7LGC8	479 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	HERC6	Q8IVU3	1022 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	FAM71D	Q8N9W8	422 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	ARNTL2	Q8WYA1	636 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZNF566	Q969W8	418 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	SEZ6L	Q9BYH1	1024 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	JMJD4	Q9H9V9	463 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	VAT1L	Q9HCJ6	419 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	TMEM8A	Q9HCN3	771 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	NRIP3	Q9NQ35	241 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	ADD3	Q9UEY8	706 aa	Known RBP	5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	FZD4	Q9ULV1	537 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	VPS4A	Q9UN37	437 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	LCT	P09848	1927 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZMYM6	O95789	1325 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	WDR19	Q8NEZ3	1342 aa		5.69	□□□□□ -1.5
PSMC6-208	ENST00000554956	LRRC37A2	A6NM11	1700 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956		F5H423	210 aa	Predicted RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	HAS3	O00219	553 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	PODXL	O00592	558 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZSCAN9	O15535	394 aa	Predicted RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZNF286B	P0CG31	522 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ABCB4	P21439	1286 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	HOXA13	P31271	388 aa	Predicted RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	TRAPPC10	P48553	1259 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	HSPA7	P48741	367 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	WDR5	P61964	334 aa	Known RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	NUCB1	Q02818	461 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	DNASE1L3	Q13609	305 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ATP1A4	Q13733	1029 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	PDCD2	Q16342	344 aa	Predicted RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	PTGIS	Q16647	500 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	FBXO38	Q6PIJ6	1188 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	RANBP10	Q6VN20	620 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZNF813	Q6ZN06	617 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	CYB5R4	Q7L1T6	521 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	NKAP	Q8N5F7	415 aa	Known RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	VPS37A	Q8NEZ2	397 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	EXOC6	Q8TAG9	804 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	OSR1	Q8TAX0	266 aa	Predicted RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ZNF398	Q8TD17	642 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	POF1B	Q8WVV4	589 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	ESR2	Q92731	530 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	GRAMD1A	Q96CP6	724 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	TMEM41A	Q96HV5	264 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	RMDN3	Q96TC7	470 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	CINP	Q9BW66	212 aa	Predicted RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	MTIF3	Q9H2K0	278 aa	Known RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	EPHX3	Q9H6B9	360 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	GAR1	Q9NY12	217 aa	Known RBP	5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	HDAC6	Q9UBN7	1215 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	MYH7	P12883	1935 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	MYH8	P13535	1937 aa		5.68	□□□□□ -1.5
PSMC6-208	ENST00000554956	TP73	O15350	636 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	CYTH3	O43739	400 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	GH1	P01241	217 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	CXCL10	P02778	98 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	IDE	P14735	1019 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	LMO1	P25800	156 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	RFC2	P35250	354 aa		5.67	□□□□□ -1.5
PSMC6-208	ENST00000554956	HSD17B4	P51659	736 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms