RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ATP13A4Q4VNC1 1196 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 NUGGCQ68CJ6 796 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 DENND2CQ68D51 928 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ZNF776Q68DI1 518 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-209ENST00000553659 RFWD3Q6PCD5 774 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 USP30Q70CQ3 517 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 STRADAQ7RTN6 431 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 PDZD3Q86UT5 571 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ARFGAP2Q8N6H7 521 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 IRGQQ8WZA9 623 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 TTC17Q96AE7 1141 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 LMLNQ96KR4 655 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ORAI3Q9BRQ5 295 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 PCDH9Q9HC56 1237 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 KLHL11Q9NVR0 708 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.31■□□□□ 0.2
ACTN1-209ENST00000553659 SCML1Q9UN30 329 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ZNF148Q9UQR1 794 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 NCKAP1Q9Y2A7 1128 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 ATP8A1Q9Y2Q0 1164 aa16.31■□□□□ 0.2
ACTN1-209ENST00000553659 H0Y8X5 98 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 DFNA5O60443 496 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 ACSL4O60488 711 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 DAB1O75553 588 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 KRT10P13645 584 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 TGM2P21980 687 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 SLC6A4P31645 630 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 FLT3P36888 993 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 CCT8P50990 548 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 OASLQ15646 514 aaKnown RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 FAM133BQ5BKY9 247 aaKnown RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 KCNT1Q5JUK3 1230 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 CEP85LQ5SZL2 805 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 AGBL2Q5U5Z8 902 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 KIAA0895LQ68EN5 471 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 RFX6Q8HWS3 928 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 FIBINQ8TAL6 211 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 SLC35B2Q8TB61 432 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 FAM172AQ8WUF8 416 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 CENPIQ92674 756 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 MYO19Q96H55 970 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 TRIM62Q9BVG3 475 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 PHACTR1Q9C0D0 580 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 STMN4Q9H169 189 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 RSPH9Q9H1X1 276 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 TMEM51Q9NW97 253 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 RRN3Q9NYV6 651 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 PCSK1NQ9UHG2 260 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 ANAPC5Q9UJX4 755 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 STAP1Q9ULZ2 295 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 RAXQ9Y2V3 346 aa16.3■□□□□ 0.2
ACTN1-209ENST00000553659 NYNRINQ9P2P1 1898 aaKnown RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 COL5A1P20908 1838 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-209ENST00000553659 CFAP69A5D8W1 941 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 TRABD2BA6NFA1 517 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 MCF2LO15068 1137 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 CST8O60676 142 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 IGHV4-34P06331 123 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 CTSKP43235 329 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 ARSEP51690 589 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 AIF1P55008 147 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 CDH6P55285 790 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 TBX4P57082 545 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 ST8SIA6P61647 398 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 SFSWAPQ12872 951 aaKnown RBP16.29■□□□□ 0.2
ACTN1-209ENST00000553659 UAP1Q16222 522 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-209ENST00000553659 SMTNL2Q2TAL5 461 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 SOWAHCQ53LP3 525 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-209ENST00000553659 TXNRD3NBQ6F5E7 133 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 LAYNQ6UX15 382 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 RELL1Q8IUW5 271 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 SCUBE3Q8IX30 993 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 HSPH1Q92598 858 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 ATP6V1G3Q96LB4 118 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 DDX50Q9BQ39 737 aaKnown RBP16.29■□□□□ 0.2
ACTN1-209ENST00000553659 TMEM109Q9BVC6 243 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 MTG2Q9H4K7 406 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 TMBIM4Q9HC24 238 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
ACTN1-209ENST00000553659 FBXL12Q9NXK8 326 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 RCOR3Q9P2K3 495 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-209ENST00000553659 DNPEPQ9ULA0 475 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 FREM2Q5SZK8 3169 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 APC2O95996 2303 aa16.29■□□□□ 0.2
ACTN1-209ENST00000553659 A0A1W2PPC4 97 aa16.28■□□□□ 0.2
ACTN1-209ENST00000553659 PIK3R2O00459 728 aa16.28■□□□□ 0.2
ACTN1-209ENST00000553659 DNALI1O14645 258 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-209ENST00000553659 VILLO15195 856 aa16.28■□□□□ 0.2
ACTN1-209ENST00000553659 RNASEH1O60930 286 aaKnown RBP16.28■□□□□ 0.2
ACTN1-209ENST00000553659 LTFP02788 710 aa16.28■□□□□ 0.2
ACTN1-209ENST00000553659 ASLP04424 464 aa16.28■□□□□ 0.2
ACTN1-209ENST00000553659 IVDP26440 423 aa16.28■□□□□ 0.2
ACTN1-209ENST00000553659 STIP1P31948 543 aaKnown RBP16.28■□□□□ 0.2
ACTN1-209ENST00000553659 NOS2P35228 1153 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms