RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ABCA2Q9BZC7 2435 aa5.5□□□□□ -1.53
HOXB3-213ENST00000552000 SPTBP11277 2137 aa5.5□□□□□ -1.53
HOXB3-213ENST00000552000 AKAP6Q13023 2319 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ACANP16112 2415 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 SPTY2D1-AS1A0A0U1RR47 76 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 VPS37CA5D8V6 355 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 D6RAR5 112 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 TMX2-CTNND1H3BSU7 103 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 KPNA3O00505 521 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 TPP1O14773 563 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 IKBKBO14920 756 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 MCF2LO15068 1137 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 SPTLC2O15270 562 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ALOX15BO15296 676 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 RAD51BO15315 384 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 DEAF1O75398 565 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 GCATO75600 419 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 NR3C1P04150 777 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CTSLP07711 333 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ANXA6P08133 673 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 TRIM49P0CI25 452 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 TRIM49CP0CI26 452 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CD19P15391 556 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 EPB42P16452 691 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF16P17020 682 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ITIH1P19827 911 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ETV5P41161 510 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 MAPK10P53779 464 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 RAD23BP54727 409 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ADKP55263 362 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 POLE2P56282 527 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 DAOAP59103 153 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CCL7P80098 99 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 AMPD3Q01432 767 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 PPP3CAQ08209 521 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 BST2Q10589 180 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 EIF2B5Q13144 721 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 EIF3IQ13347 325 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 PDE1CQ14123 709 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 FGL2Q14314 439 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 RAP1GAP2Q684P5 730 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 NEK5Q6P3R8 708 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 BORAQ6PGQ7 559 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 KYAT3Q6YP21 454 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 PARGQ86W56 976 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CHSY1Q86X52 802 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 RBFAQ8N0V3 343 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 SDR16C5Q8N3Y7 309 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CCDC150Q8NCX0 1101 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 DQX1Q8TE96 717 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CCDC74AQ96AQ1 378 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 FCRL2Q96LA5 508 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 BMFQ96LC9 184 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 GFM1Q96RP9 751 aaKnown RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 C7orf25Q9BPX7 421 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 BOCQ9BWV1 1114 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 SLC12A9Q9BXP2 914 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CNGB3Q9NQW8 809 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ZNF71Q9NQZ8 489 aaPredicted RBP5.49□□□□□ -1.53
HOXB3-213ENST00000552000 GPR27Q9NS67 375 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 CISHQ9NSE2 258 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 FOXJ2Q9P0K8 574 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 SPASTQ9UBP0 616 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 GULP1Q9UBP9 304 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 HESX1Q9UBX0 185 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 SLC25A13Q9UJS0 675 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 ANAPC2Q9UJX6 822 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 TSPAN16Q9UKR8 245 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 LOXL2Q9Y4K0 774 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 HS3ST3A1Q9Y663 406 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 DOCK4Q8N1I0 1966 aa5.49□□□□□ -1.53
HOXB3-213ENST00000552000 A0A1W2PQM1 296 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 LMO7DNF2Z398 122 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 F8W735 103 aaPredicted RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 RNF103O00237 685 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 MTSS1O43312 755 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ATP9BO43861 1147 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 AGFG2O95081 481 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 PAK4O96013 591 aaPredicted RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 WNT11O96014 354 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 LTFP02788 710 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 RPLP0P05388 317 aaKnown RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 TACR2P21452 398 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CHRNA3P32297 505 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 RABIFP47224 123 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 VAMP7P51809 220 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 NUCB2P80303 420 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CCDC15Q0P6D6 951 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SLC12A1Q13621 1099 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 SLC39A14Q15043 492 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 TCEA2Q15560 299 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ZC3H12AQ5D1E8 599 aaKnown RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CNNM4Q6P4Q7 775 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ERN2Q76MJ5 926 aaKnown RBP5.48□□□□□ -1.53
HOXB3-213ENST00000552000 TAC4Q86UU9 113 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 DTX1Q86Y01 620 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 PHACTR4Q8IZ21 702 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 ALDH16A1Q8IZ83 802 aa5.48□□□□□ -1.53
HOXB3-213ENST00000552000 CCAR2Q8N163 923 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms