RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PGDP52209 483 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 MC1RQ01726 317 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 SGCGQ13326 291 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 ZRSR2Q15696 482 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 ZC3H12AQ5D1E8 599 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 CEP135Q66GS9 1140 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 KDELC2Q7Z4H8 507 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 GDF7Q7Z4P5 450 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 SIX6OS1Q8N1H7 587 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 FAM46DQ8NEK8 389 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 OR1E3Q8WZA6 343 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 TAF4BQ92750 862 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 SNRNP40Q96DI7 357 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 CLIC6Q96NY7 704 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 REPIN1Q9BWE0 567 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 TRIM8Q9BZR9 551 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 CYP3A43Q9HB55 503 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 MRPL40Q9NQ50 206 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 CROTQ9UKG9 612 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 TLR6Q9Y2C9 796 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 ACTL7AQ9Y615 435 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 RPS6KL1Q9Y6S9 549 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 MDC1Q14676 2089 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 DOCK4Q8N1I0 1966 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 RASGRP1O95267 797 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 LTFP02788 710 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 L1CAMP32004 1257 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 DLSTP36957 453 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 ANAPC15P60006 121 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 SRP54P61011 504 aaKnown RBP13.62□□□□□ -0.23
SNRPF-203ENST00000551316 YPEL5P62699 121 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 SEMA5AQ13591 1074 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 RRAGBQ5VZM2 374 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 ENPP7Q6UWV6 458 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 ZGRF1Q86YA3 2104 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 APLFQ8IW19 511 aaPredicted RBP13.62□□□□□ -0.23
SNRPF-203ENST00000551316 C12orf56Q8IXR9 622 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 RBMXL3Q8N7X1 1067 aaKnown RBP13.62□□□□□ -0.23
SNRPF-203ENST00000551316 ATP11CQ8NB49 1132 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 KCTD13Q8WZ19 329 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 RUFY1Q96T51 708 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 PANK2Q9BZ23 570 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 ASPSCR1Q9BZE9 553 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 FGF22Q9HCT0 170 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 NTNG1Q9Y2I2 539 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 COQ6Q9Y2Z9 468 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 OR1A2Q9Y585 309 aa13.62□□□□□ -0.23
SNRPF-203ENST00000551316 MN1Q10571 1320 aaPredicted RBP13.62□□□□□ -0.23
SNRPF-203ENST00000551316 STAB1Q9NY15 2570 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 ANKUB1A6NFN9 424 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 BHMG1C9JSJ3 638 aaPredicted RBP13.61□□□□□ -0.23
SNRPF-203ENST00000551316 MMP20O60882 483 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 RPN1P04843 607 aaKnown RBP13.61□□□□□ -0.23
SNRPF-203ENST00000551316 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 BMP6P22004 513 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 CSTF2P33240 577 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNRPF-203ENST00000551316 NR1D2Q14995 579 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 SYPL2Q5VXT5 272 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 OR6K2Q8NGY2 324 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 ASB12Q8WXK4 309 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 RNF34Q969K3 372 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 EFHD1Q9BUP0 239 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 BACH2Q9BYV9 841 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 TMEM168Q9H0V1 697 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 CNGB3Q9NQW8 809 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 CISHQ9NSE2 258 aa13.61□□□□□ -0.23
SNRPF-203ENST00000551316 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
SNRPF-203ENST00000551316 F5H5T6 163 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 NADKO95544 446 aaPredicted RBP13.6□□□□□ -0.23
SNRPF-203ENST00000551316 PDCP20941 246 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 CASP1P29466 404 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 AP3M2P53677 418 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
SNRPF-203ENST00000551316 NFATC4Q14934 902 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 FAM26FQ5R3K3 315 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 PAPD7Q5XG87 772 aaKnown RBP13.6□□□□□ -0.23
SNRPF-203ENST00000551316 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 TAF8Q7Z7C8 310 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 C17orf82Q86X59 251 aaPredicted RBP13.6□□□□□ -0.23
SNRPF-203ENST00000551316 ZNF295-AS1Q8N0V1 137 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 SCML4Q8N228 414 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 CCDC112Q8NEF3 446 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 OR4D9Q8NGE8 314 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 PPP1R16AQ96I34 528 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 SERPINB11Q96P15 392 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 MDFIQ99750 246 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 SLC25A23Q9BV35 468 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 SPATS2LQ9NUQ6 558 aaKnown RBP13.6□□□□□ -0.23
SNRPF-203ENST00000551316 KLQ9UEF7 1012 aa13.6□□□□□ -0.23
SNRPF-203ENST00000551316 FLNAP21333 2647 aaKnown RBP13.6□□□□□ -0.23
SNRPF-203ENST00000551316 FBN1P35555 2871 aaKnown RBP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 A6NCN8 305 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms