RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 DESP17661 470 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 DGKAP23743 735 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 CASP14P31944 242 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 HTR7P34969 479 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 NDST2P52849 883 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 TPM4P67936 248 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 ZBED6P86452 979 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 SEMG2Q02383 582 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 FZD2Q14332 565 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 SMAD1Q15797 465 aaKnown RBP10.84□□□□□ -0.67
CHEK1-218ENST00000544373 SMTNL2Q2TAL5 461 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 INAVAQ3KP66 663 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 PTAR1Q7Z6K3 402 aaPredicted RBP10.84□□□□□ -0.67
CHEK1-218ENST00000544373 OXR1Q8N573 874 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 CASKIN2Q8WXE0 1202 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 TSC1Q92574 1164 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 SYN2Q92777 582 aaPredicted RBP10.84□□□□□ -0.67
CHEK1-218ENST00000544373 ARHGEF26Q96DR7 871 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 NSMCE3Q96MG7 304 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 OSBPL1AQ9BXW6 950 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 ZWILCHQ9H900 591 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 GPR27Q9NS67 375 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 KLF15Q9UIH9 416 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 RALYQ9UKM9 306 aaKnown RBP10.84□□□□□ -0.67
CHEK1-218ENST00000544373 HS3ST3A1Q9Y663 406 aa10.84□□□□□ -0.67
CHEK1-218ENST00000544373 FAM208BQ5VWN6 2430 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 NBEAQ8NFP9 2946 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 DFFAO00273 331 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 MUSKO15146 869 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 SIGLEC6O43699 453 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 SERPING1P05155 500 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 GIMD1P0DJR0 217 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 MYF5P13349 255 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 ACADVLP49748 655 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 SGCGQ13326 291 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 DPYSQ14117 519 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 ZSWIM9Q86XI8 627 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 CAMK1DQ8IU85 385 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 TSEN2Q8NCE0 465 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 MDM1Q8TC05 714 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 RAB7BQ96AH8 199 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 CENPTQ96BT3 561 aa10.83□□□□□ -0.68
CHEK1-218ENST00000544373 WRAP53Q9BUR4 548 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 XPO4Q9C0E2 1151 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 MRPL47Q9HD33 250 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 PNMA8BQ9ULN7 279 aaPredicted RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 LUC7L2Q9Y383 392 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 BZW2Q9Y6E2 419 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 SMG1Q96Q15 3661 aaKnown RBP10.83□□□□□ -0.68
CHEK1-218ENST00000544373 TTC24A2A3L6 582 aaPredicted RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 TMEM8BA6NDV4 472 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 A6NNZ2 444 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 EIF3CLB5ME19 914 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 FFAR2O15552 330 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PIAS2O75928 621 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PRKCGP05129 697 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 RARAP10276 462 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 AMPD1P23109 780 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PCK1P35558 622 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 HCAR3P49019 387 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 RAD51Q06609 339 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 CAMK2BQ13554 666 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PDE1CQ14123 709 aaPredicted RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PROX2Q3B8N5 592 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 KYAT3Q6YP21 454 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 POLNQ7Z5Q5 900 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 VPS36Q86VN1 386 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PSTKQ8IV42 348 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 HSPH1Q92598 858 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 TRIM11Q96F44 468 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 LENG8Q96PV6 779 aaPredicted RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 EIF3CQ99613 913 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 NUP85Q9BW27 656 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 CPEB1Q9BZB8 566 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 SUV39H2Q9H5I1 410 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 MBNL1Q9NR56 388 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 DNAJC28Q9NX36 388 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 DKK3Q9UBP4 350 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 SPTY2D1-AS1A0A0U1RR47 76 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 ARHGAP42A6NI28 874 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 FPGTO14772 594 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PALMO75781 387 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 NEBLO76041 1014 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 CYP1A2P05177 515 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PYGBP11216 843 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 CKMT2P17540 419 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PFN3P60673 137 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 DPYSL2Q16555 572 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 UGP2Q16851 508 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 CCDC122Q5T0U0 273 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 ALKBH5Q6P6C2 394 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 ASB12Q8WXK4 309 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 CSPG4P5Q96PW8 444 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 PCDH12Q9NPG4 1184 aa10.82□□□□□ -0.68
CHEK1-218ENST00000544373 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 IPO11Q9UI26 975 aaKnown RBP10.82□□□□□ -0.68
CHEK1-218ENST00000544373 NENFQ9UMX5 172 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms