RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 OR7D4Q8NG98 312 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 DIS3LQ8TF46 1054 aaKnown RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 PRR11Q96HE9 360 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 FEM1CQ96JP0 617 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 PRICKLE1Q96MT3 831 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 SPON2Q9BUD6 331 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ACE2Q9BYF1 805 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 FAM96AQ9H5X1 160 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 TMEM114B3SHH9 223 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 MUSKO15146 869 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 TRIM13O60858 407 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 ATXN1LP0C7T5 689 aaKnown RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 LAG3P18627 525 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 HLA-DPA1P20036 260 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 HOXD9P28356 352 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 PPP3CCP48454 512 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF177Q13360 481 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 HSF5Q4G112 596 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 FAM91A1Q658Y4 838 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 KCTD4Q8WVF5 259 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF689Q96CS4 500 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 PTCD3Q96EY7 689 aaKnown RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 SORT1Q99523 831 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 CINPQ9BW66 212 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 C1QTNF1Q9BXJ1 281 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 STN1Q9H668 368 aaKnown RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 GKN1Q9NS71 199 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 SPG21Q9NZD8 308 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 CPSF2Q9P2I0 782 aaKnown RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 UBA2Q9UBT2 640 aaPredicted RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 SEPT3Q9UH03 358 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 RUVBL2Q9Y230 463 aaKnown RBP17.21■□□□□ 0.35
PTPRO-209ENST00000543886 LTBP2Q14767 1821 aa17.21■□□□□ 0.35
PTPRO-209ENST00000543886 MROH6A6NGR9 719 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 GJB3O75712 270 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 HSPA4LO95757 839 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 KLKB1P03952 638 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 FGF1P05230 155 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 RHOCP08134 193 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 SERPINF2P08697 491 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 CALB2P22676 271 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 PRAMEP78395 509 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 POU4F1Q01851 419 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 TWF1Q12792 350 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 MSLNQ13421 630 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-209ENST00000543886 LAMB3Q13751 1172 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 RAB33AQ14088 237 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 ADGRF1Q5T601 910 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 ZYG11AQ6WRX3 759 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 CHST9Q7L1S5 443 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 MFSD6LQ8IWD5 586 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 OR13J1Q8NGT2 312 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 VWCEQ96DN2 955 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 DDX50Q9BQ39 737 aaKnown RBP17.2■□□□□ 0.34
PTPRO-209ENST00000543886 NOD2Q9HC29 1040 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 ARMCX1Q9P291 453 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 PCDHB12Q9Y5F1 795 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 A0A087X1B8 175 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 C2orf78A6NCI8 922 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 H3BNC9 293 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 SLC7A4O43246 635 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 KDELR3O43731 214 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 DEFB103AP81534 67 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 CEP97Q8IW35 865 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 OR52K2Q8NGK3 314 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 OR6Y1Q8NGX8 325 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 OR6P1Q8NGX9 317 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 MGME1Q9BQP7 344 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 TBC1D10AQ9BXI6 508 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 KLF16Q9BXK1 252 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-209ENST00000543886 RNF38Q9H0F5 515 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 CHD5Q8TDI0 1954 aa17.2■□□□□ 0.34
PTPRO-209ENST00000543886 A0A1B0GVM2 712 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 ILVBLA1L0T0 632 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 TCAF2A6NFQ2 919 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 TK2O00142 265 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 EPOP01588 193 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 ESRRAP11474 423 aaPredicted RBP17.19■□□□□ 0.34
PTPRO-209ENST00000543886 GLRBP48167 497 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 CLCN5P51795 746 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 PGGT1BP53609 377 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 EPHB3P54753 998 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 ZNF460Q14592 562 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 TSNAXIP1Q2TAA8 658 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 ALG1LQ6GMV1 187 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 LRRC8EQ6NSJ5 796 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 DDX53Q86TM3 631 aaKnown RBP17.19■□□□□ 0.34
PTPRO-209ENST00000543886 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 CMTR2Q8IYT2 770 aaKnown RBP17.19■□□□□ 0.34
PTPRO-209ENST00000543886 UTP4Q969X6 686 aaKnown RBP17.19■□□□□ 0.34
PTPRO-209ENST00000543886 EBF4Q9BQW3 602 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 PNPOQ9NVS9 261 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 OXSMQ9NWU1 459 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 AGO1Q9UL18 857 aaKnown RBP17.19■□□□□ 0.34
PTPRO-209ENST00000543886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
PTPRO-209ENST00000543886 TSPAN3O60637 253 aa17.19■□□□□ 0.34
PTPRO-209ENST00000543886 SGSHP51688 502 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms