RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 JADE1Q6IE81 842 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 SNRNP48Q6IEG0 339 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 PID1Q7Z2X4 250 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 CDR2LQ86X02 465 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 PSTKQ8IV42 348 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 AQP12AQ8IXF9 295 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 PYROXD2Q8N2H3 581 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 TTC39CQ8N584 583 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 CCNYQ8ND76 341 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 OR13F1Q8NGS4 319 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 SLC16A10Q8TF71 515 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 FBXL20Q96IG2 436 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 FAR2Q96K12 515 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 PCYT2Q99447 389 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 EIF2AQ9BY44 585 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 B3GNT5Q9BYG0 378 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 RHOJQ9H4E5 214 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 FZD1Q9UP38 647 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 GJA3Q9Y6H8 435 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 DHRS12A0PJE2 317 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 KPNA4O00629 521 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 CPNE6O95741 557 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 BCL10O95999 233 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 FASP25445 335 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 GNL1P36915 607 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 ETFBP38117 255 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 GNA12Q03113 381 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 INPP5AQ14642 412 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 NEDD8Q15843 81 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 TMEM132AQ24JP5 1023 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 TRIM16LQ309B1 348 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 GALNT18Q6P9A2 607 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 LAYNQ6UX15 382 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 GADL1Q6ZQY3 521 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 FAM83AQ86UY5 434 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 ZC3HC1Q86WB0 502 aaKnown RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 TRIM50Q86XT4 487 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 PCYOX1LQ8NBM8 494 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 TRIM15Q9C019 465 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 MAF1Q9H063 256 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 CDT1Q9H211 546 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 SNX25Q9H3E2 840 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 FAM124BQ9H5Z6 455 aaPredicted RBP18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 CASS4Q9NQ75 786 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 NSMCE4AQ9NXX6 385 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 GTSE1Q9NYZ3 720 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 TSC22D4Q9Y3Q8 395 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 MAGEB16A2A368 324 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 LACTBL1A8MY62 500 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 CLPXO76031 633 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 RASAL1O95294 804 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 CLIC3O95833 236 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 IL10P22301 178 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 HLCSP50747 726 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 PPP1R26Q5T8A7 1209 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 SPRED1Q7Z699 444 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 NETO2Q8NC67 525 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 TAMM41Q96BW9 452 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 CENPNQ96H22 339 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 FEM1CQ96JP0 617 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 FAM149AA5PLN7 773 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 B4GALT5O43286 388 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 CAPGP40121 348 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 ZNF362Q5T0B9 420 aaPredicted RBP18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 TSTD2Q5T7W7 516 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 PRAMEF18Q5VWM3 479 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 SAMD7Q7Z3H4 446 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 GOLM1Q8NBJ4 401 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 SLC35F5Q8WV83 523 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 PRDM12Q9H4Q4 367 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 MEAF6Q9HAF1 191 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 ACOT9Q9Y305 439 aa18.75■□□□□ 0.59
SFSWAP-207ENST00000538548 C1orf232A0A0U1RR37 186 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 KRBA1A5PL33 1030 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 GABBR2O75899 941 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 PSMA4P25789 261 aaKnown RBP18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 ICAM3P32942 547 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 GRM5P41594 1212 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 CCT8P50990 548 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 TNK2Q07912 1038 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 TMTC4Q5T4D3 741 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 FRA10AC1Q70Z53 315 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 SLC26A9Q7LBE3 791 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 IGFN1Q86VF2 1251 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 ROPN1LQ96C74 230 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 GMLQ99445 158 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 PKD2L2Q9NZM6 624 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 PGAP2Q9UHJ9 254 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 OAZ3Q9UMX2 235 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 NRP1O14786 923 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 AVPR1AP37288 418 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 STAT5BP51692 787 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 PGGT1BP53609 377 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 OXA1LQ15070 435 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 PSMD5Q16401 504 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 CNSTQ6PJW8 725 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 OFCC1Q8IZS5 231 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 AFAP1L2Q8N4X5 818 aa18.74■□□□□ 0.59
SFSWAP-207ENST00000538548 DHRSXQ8N5I4 330 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms