RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 REXO5Q96IC2 774 aaKnown RBP10.72□□□□□ -0.69
CLIP1-209ENST00000537178 PLGRKTQ9HBL7 147 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SPAG4Q9NPE6 437 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ABCB10Q9NRK6 738 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 A0A0A0MRY4 1105 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 PGRMC2O15173 223 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 CHADO15335 359 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 IDH3BO43837 385 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 CAPGP40121 348 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SLC26A3P40879 764 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 UGT2B15P54855 530 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 HSPA14Q0VDF9 509 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 PRKG2Q13237 762 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ZNF410Q86VK4 478 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ZDHHC15Q96MV8 337 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SPATA13Q96N96 652 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 TKTL2Q9H0I9 626 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ABCC13Q9NSE7 274 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 GNPTGQ9UJJ9 305 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
CLIP1-209ENST00000537178 AP3D1O14617 1153 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 FSBPO95073 299 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 CAMK1Q14012 370 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 OLFML2AQ68BL7 652 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 WNT8BQ93098 351 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SLC35C1Q96A29 364 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 LMAN2LQ9H0V9 348 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 LRMDAQ9H2I8 198 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ETAA1Q9NY74 926 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 MARCH2Q9P0N8 246 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 GIT1Q9Y2X7 761 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 TRIM38O00635 465 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 TSHRP16473 764 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 IL12AP29459 219 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 NOS2P35228 1153 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SMCO1Q147U7 214 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 C5orf22Q49AR2 442 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ESRP1Q6NXG1 681 aaKnown RBP10.72□□□□□ -0.69
CLIP1-209ENST00000537178 ZC3H7AQ8IWR0 971 aaKnown RBP10.72□□□□□ -0.69
CLIP1-209ENST00000537178 CYP4X1Q8N118 509 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 KLHL23Q8NBE8 558 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 CKAP2Q8WWK9 683 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 DNAJC18Q9H819 358 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 GGA2Q9UJY4 613 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 PPIEQ9UNP9 301 aaKnown RBP10.72□□□□□ -0.69
CLIP1-209ENST00000537178 COG5Q9UP83 839 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 SLC12A4Q9UP95 1085 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 TNS2Q63HR2 1409 aa10.72□□□□□ -0.69
CLIP1-209ENST00000537178 A0A0B4J269 797 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ZSCAN5CA6NGD5 496 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 OPLAHO14841 1288 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 PEX11AO75192 247 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 USP12O75317 370 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 SERPINB7O75635 380 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 KRT33AO76009 404 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 CCDC166P0CW27 439 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 TCF4P15884 667 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 AMD1P17707 334 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 TOB1P50616 345 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ABATP80404 500 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 NR1D2Q14995 579 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 TSC22D1Q15714 1073 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 PYDC2Q56P42 97 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 TMEM63BQ5T3F8 832 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 REPS2Q8NFH8 660 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ADAM32Q8TC27 787 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ACMSDQ8TDX5 336 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 CSGALNACT1Q8TDX6 532 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 BSNDQ8WZ55 320 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ASB8Q9H765 288 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 SLC35C2Q9NQQ7 365 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ETNK2Q9NVF9 386 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 COL4A1P02462 1669 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 A0A0U1RQJ8 604 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 DDX3XO00571 662 aaKnown RBP eCLIP10.71□□□□□ -0.695e-15■■■■□ 21
CLIP1-209ENST00000537178 TPP1O14773 563 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 SLC25A12O75746 678 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 FAM86B2P0C5J1 330 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 EPORP19235 508 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 PPIBP23284 216 aaKnown RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ACADLP28330 430 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 TTPAP49638 278 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 ATN1P54259 1190 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 SNRPD1P62314 119 aaKnown RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 PPM1LQ5SGD2 360 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 C16orf46Q6P387 395 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 GCNT7Q6ZNI0 430 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 CCDC36Q8IYA8 594 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 AENQ8WTP8 325 aaKnown RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 CD101Q93033 1021 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 MLPHQ9BV36 600 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 RIOX1Q9H6W3 641 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 GDF3Q9NR23 364 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 SSR3Q9UNL2 185 aa10.71□□□□□ -0.69
CLIP1-209ENST00000537178 SCAF8Q9UPN6 1271 aaKnown RBP10.71□□□□□ -0.69
CLIP1-209ENST00000537178 RGSL1A5PLK6 1076 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms