RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 SPATS2LQ9NUQ6 558 aaKnown RBP5.66□□□□□ -1.5
PRKDC-208ENST00000536710 TMEM184CQ9NVA4 438 aa5.66□□□□□ -1.5
PRKDC-208ENST00000536710 SEL1LQ9UBV2 794 aa5.66□□□□□ -1.5
PRKDC-208ENST00000536710 PCDHGB4Q9UN71 923 aa5.66□□□□□ -1.5
PRKDC-208ENST00000536710 SLC4A4Q9Y6R1 1079 aa5.66□□□□□ -1.5
PRKDC-208ENST00000536710 EBAG9O00559 213 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TP73O15350 636 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 BCAT2O15382 392 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 PAGE4O60829 102 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TFP02787 698 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 CLTBP09497 229 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 CTSAP10619 480 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TFPIP10646 304 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 CTPS1P17812 591 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 EPHB2P29323 1055 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TM4SF1P30408 202 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TNFSF8P32971 234 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 PIP4K2AP48426 406 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 HDAC4P56524 1084 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 PRAMEP78395 509 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 CSTF3Q12996 717 aaKnown RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 CAPSQ13938 189 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 COL28A1Q2UY09 1125 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 FAM83HQ6ZRV2 1179 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 SZRD1Q7Z422 152 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 UBE2Q1Q7Z7E8 422 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 ADGRG3Q86Y34 549 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 OR8H2Q8N162 312 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 NEK9Q8TD19 979 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 PSPC1Q8WXF1 523 aaKnown RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 DDB2Q92466 427 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 DPF1Q92782 380 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 MAP7D2Q96T17 732 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 YME1L1Q96TA2 773 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 BPIFA1Q9NP55 256 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 ADARB2Q9NS39 739 aaKnown RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 RNF146Q9NTX7 359 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TMEM5Q9Y2B1 443 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 AAR2Q9Y312 384 aaKnown RBP5.65□□□□□ -1.5
PRKDC-208ENST00000536710 ADAM18Q9Y3Q7 739 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TTLL3Q9Y4R7 772 aa5.65□□□□□ -1.5
PRKDC-208ENST00000536710 TRBV5-3A0A0A0MS03 114 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 KCNU1A8MYU2 1149 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 KLRF2D3W0D1 207 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 NPIPB11E5RHQ5 1161 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 HSPB6O14558 160 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 ADAM10O14672 748 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 SEC14L5O43304 696 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 GJB3O75712 270 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 IPO7O95373 1038 aaKnown RBP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 MT-CYBP00156 380 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 SLPIP03973 132 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 CSH1P0DML2 217 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 CSH2P0DML3 217 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 CYP19A1P11511 503 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 KRT20P35900 424 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 CENPAP49450 140 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 ITGADQ13349 1161 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 FGFBP1Q14512 234 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 HSPB2Q16082 182 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 DUSP28Q4G0W2 176 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 GKAP1Q5VSY0 366 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 SLC18B1Q6NT16 456 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 TMCO3Q6UWJ1 677 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 YTHDF3Q7Z739 585 aaKnown RBP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 ANKRD13BQ86YJ7 626 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 ARHGAP12Q8IWW6 846 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 SLC44A5Q8NCS7 719 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 GJC3Q8NFK1 279 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 MMABQ96EY8 250 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-208ENST00000536710 STRA6Q9BX79 667 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 B3GNT4Q9C0J1 378 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 ASAH2Q9NR71 780 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 SMYD2Q9NRG4 433 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 ANKEF1Q9NU02 776 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 PLK2Q9NYY3 685 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 DLGAP2Q9P1A6 1054 aa5.64□□□□□ -1.51
PRKDC-208ENST00000536710 LATS1O95835 1130 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 TOP3BO95985 862 aaKnown RBP5.63□□□□□ -1.51
PRKDC-208ENST00000536710 MMP3P08254 477 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CHRNB1P11230 501 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 IL7RP16871 459 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CDH2P19022 906 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-208ENST00000536710 MCM3P25205 808 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 GCH1P30793 250 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CDAP32320 146 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 RYKP34925 604 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 F2RL1P55085 397 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 CDH8P55286 799 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 GRIK3Q13003 919 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 ACVR2BQ13705 512 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 PKP1Q13835 747 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 ARHGEF6Q15052 776 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 ALG11Q2TAA5 492 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 SUPT20HL1Q3ZLR7 823 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 PIK3CD-AS1Q5SR53 167 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 PRAMEF19Q5SWL8 479 aa5.63□□□□□ -1.51
PRKDC-208ENST00000536710 PAPD7Q5XG87 772 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms