RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 SLC8A2Q9UPR5 921 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 SNX13Q9Y5W8 968 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 KCNH1O95259 989 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 ZNF26P17031 533 aaPredicted RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 SLC1A6P48664 564 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 PITX1P78337 314 aaPredicted RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 TAZQ16635 292 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 SV2CQ496J9 727 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 CTU1Q7Z7A3 348 aaKnown RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 B3GALNT2Q8NCR0 500 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 ATP6V1E2Q96A05 226 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 LENG8Q96PV6 779 aaPredicted RBP14.13□□□□□ -0.15
LIG1-203ENST00000536218 RAB6BQ9NRW1 208 aa14.13□□□□□ -0.15
LIG1-203ENST00000536218 CASTOR2A6NHX0 329 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 APOL1O14791 398 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 SNNO75324 88 aaPredicted RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 BMP10O95393 424 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 INHBBP09529 407 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 TUBA4AP68366 448 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PMS2P3Q13401 168 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 DNASE1L3Q13609 305 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 IL23RQ5VWK5 629 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 BNC2Q6ZN30 1099 aaPredicted RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 SLC26A11Q86WA9 606 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PQLC3Q8N755 202 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 TANKQ92844 425 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PPWD1Q96BP3 646 aaKnown RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 FAF2Q96CS3 445 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 RNF38Q9H0F5 515 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 CNGB3Q9NQW8 809 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 MIOSQ9NXC5 875 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 ATP5BP06576 529 aaKnown RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 KCNE1P15382 129 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 CCT8P50990 548 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 NSUN2Q08J23 767 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIG1-203ENST00000536218 NOMO1Q15155 1222 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PPM1LQ5SGD2 360 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 ARHGAP17Q68EM7 881 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 SLC9A4Q6AI14 798 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 USP43Q70EL4 1123 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 BTLAQ7Z6A9 289 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 DEFB106AQ8N104 65 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 CRYBG2Q8N1P7 616 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 CLIP4Q8N3C7 705 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 CCDC185Q8N715 623 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 NAT8LQ8N9F0 302 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PTCD2Q8WV60 388 aaKnown RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 EFHD2Q96C19 240 aaPredicted RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 TBCBQ99426 244 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 OLFM1Q99784 485 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PAAF1Q9BRP4 392 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 OSBPL11Q9BXB4 747 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 CXorf49A8MYA2 514 aaPredicted RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 ARL1P40616 181 aaPredicted RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 FLT3LGP49771 235 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 MAP3K7CLP57077 242 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 SNX16P57768 344 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 MRPS6P82932 125 aaKnown RBP14.12□□□□□ -0.15
LIG1-203ENST00000536218 GBE1Q04446 702 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 IKBKEQ14164 716 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 PCGF5Q86SE9 256 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 C11orf74Q86VG3 221 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 SNX32Q86XE0 403 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 HASPINQ8TF76 798 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 LRTOMTQ8WZ04 291 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 TRIB2Q92519 343 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 TNIP3Q96KP6 325 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 SLC29A1Q99808 456 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 MRGBPQ9NV56 204 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 CDH7Q9ULB5 785 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 MFHAS1Q9Y4C4 1052 aa14.12□□□□□ -0.15
LIG1-203ENST00000536218 ZBTB14O43829 449 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CYP2F1P24903 491 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 GABRB3P28472 473 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 PNPLA4P41247 253 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 NR4A2P43354 598 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CLCNKBP51801 687 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CSE1LP55060 971 aaKnown RBP14.11□□□□□ -0.15
LIG1-203ENST00000536218 TXNL4AP83876 142 aaKnown RBP14.11□□□□□ -0.15
LIG1-203ENST00000536218 CREB5Q02930 508 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 KLF10Q13118 480 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 PCBP1Q15365 356 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIG1-203ENST00000536218 MAVSQ7Z434 540 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CARM1Q86X55 608 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 ADAM32Q8TC27 787 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 TRUB1Q8WWH5 349 aaKnown RBP14.11□□□□□ -0.15
LIG1-203ENST00000536218 SOCS4Q8WXH5 440 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 LRRC4Q9HBW1 653 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 FAM105AQ9NUU6 356 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 AP4E1Q9UPM8 1137 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CPQQ9Y646 472 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CROCCQ5TZA2 2017 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 GOLGA8QA0A0J9YX86 632 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 GOLGA8OA6NCC3 632 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 GOLGA8NF8WBI6 632 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 DUSP11O75319 330 aaKnown RBP14.11□□□□□ -0.15
LIG1-203ENST00000536218 ENDOD1O94919 500 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 CHRNB1P11230 501 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms