RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CAMKK1Q8N5S9 505 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 TXNDC5Q8NBS9 432 aaKnown RBP16.41■□□□□ 0.22
VAMP1-205ENST00000535927 NOA1Q8NC60 698 aaKnown RBP16.41■□□□□ 0.22
VAMP1-205ENST00000535927 RPLP0P6Q8NHW5 317 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 LRRN4Q8WUT4 740 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 UBXN4Q92575 508 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 FAM129BQ96TA1 746 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 TM6SF2Q9BZW4 377 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 RSPH9Q9H1X1 276 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-205ENST00000535927 SUV39H2Q9H5I1 410 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 RRAGDQ9NQL2 400 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-205ENST00000535927 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 SHOC2Q9UQ13 582 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 TTLL3Q9Y4R7 772 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 ZNF318Q5VUA4 2279 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 ANKRD36A6QL64 1941 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 LOC285095A0A1B0GVY8 99 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 TSPAN11A1L157 253 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 BHMG1C9JSJ3 638 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 SIN3BO75182 1162 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 PAPSS2O95340 614 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 METTL18O95568 372 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 MLNP12872 115 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 HOXB2P14652 356 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 HLA-DPA1P20036 260 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 C5AR1P21730 350 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 PRKCHP24723 683 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 PSMB4P28070 264 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 CD86P42081 329 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 LMAN1P49257 510 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 MAXP61244 160 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 DSC2Q02487 901 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 NHLH1Q02575 133 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 CDK18Q07002 472 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 NIPAL4Q0D2K0 466 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 CRY1Q16526 586 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ZNF805Q5CZA5 627 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ARMC12Q5T9G4 340 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ZNF776Q68DI1 518 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 RANBP10Q6VN20 620 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 GDPD4Q6W3E5 623 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 SFTPA1Q8IWL2 248 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 RAVER1Q8IY67 606 aaKnown RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 RAB7BQ96AH8 199 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ECHDC3Q96DC8 303 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ZNF419Q96HQ0 510 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ACOX2Q99424 681 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 C19orf43Q9BQ61 176 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 FSD1LQ9BXM9 530 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 PHACTR1Q9C0D0 580 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 TNKS2Q9H2K2 1166 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 XAB2Q9HCS7 855 aaKnown RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 EVLQ9UI08 416 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-205ENST00000535927 PHTF1Q9UMS5 762 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 PPIL1Q9Y3C6 166 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 ACTL7AQ9Y615 435 aa16.4■□□□□ 0.22
VAMP1-205ENST00000535927 RIOK3O14730 519 aaKnown RBP16.39■□□□□ 0.21
VAMP1-205ENST00000535927 ADAM23O75077 832 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 HEXIM1O94992 359 aaKnown RBP16.39■□□□□ 0.21
VAMP1-205ENST00000535927 NDST3O95803 873 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 MMP2P08253 660 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 ZSCAN5DPP0CG00 497 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 ETS1P14921 441 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 HOXA6P31267 233 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 RGRP47804 291 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 WNT3AP56704 352 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 BASP1P80723 227 aaKnown RBP16.39■□□□□ 0.21
VAMP1-205ENST00000535927 CFAP58Q5T655 872 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 ATXN7L2Q5T6C5 722 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-205ENST00000535927 KDELC1Q6UW63 502 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 GLIS1Q8NBF1 620 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 IFT43Q96FT9 208 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 RBM15Q96T37 977 aaKnown RBP eCLIP16.39■□□□□ 0.21
VAMP1-205ENST00000535927 HDAC8Q9BY41 377 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 CEP41Q9BYV8 373 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 DYRK4Q9NR20 520 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 RAI2Q9Y5P3 530 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 WASF2Q9Y6W5 498 aa16.39■□□□□ 0.21
VAMP1-205ENST00000535927 A0A1W2PQF6 199 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 M0R296 226 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 TRAFD1O14545 582 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 SLC7A4O43246 635 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 FZD6O60353 706 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 PGLSO95336 258 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 FGF1P05230 155 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 APRTP07741 180 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 HLA-EP13747 358 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 AOC1P19801 751 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 ITGB7P26010 798 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 ADRA1AP35348 466 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 CCR3P51677 355 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 KCNJ11Q14654 390 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 RNASEH2BQ5TBB1 312 aaKnown RBP16.38■□□□□ 0.21
VAMP1-205ENST00000535927 USP30Q70CQ3 517 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 KBTBD6Q86V97 674 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 STK40Q8N2I9 435 aa16.38■□□□□ 0.21
VAMP1-205ENST00000535927 PIP4K2CQ8TBX8 421 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms