RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TOM1L1O75674 476 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PDGFRBP09619 1106 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PTPN1P18031 435 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 KRT15P19012 456 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 WT1P19544 449 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 CYP3A5P20815 502 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ABCB4P21439 1286 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 BDNFP23560 247 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PRKCHP24723 683 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 LMO1P25800 156 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 CDC25AP30304 524 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 EIF2DP41214 584 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ACOT2P49753 483 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 CCT8P50990 548 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 COPAP53621 1224 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PSMC1P62191 440 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 SLC7A9P82251 487 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 MCL1Q07820 350 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 TAF10Q12962 218 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 MAPK7Q13164 816 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 NFYCQ13952 458 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PCOLCEQ15113 449 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF174Q15697 407 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ARL13BQ3SXY8 428 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 FNDC7Q5VTL7 733 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 CLEC18BQ6UXF7 455 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 KCNK18Q7Z418 384 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 MTDHQ86UE4 582 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 METTL23Q86XA0 190 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 LDLRAD3Q86YD5 345 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 FAM177A1Q8N128 213 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PDCL2Q8N4E4 241 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF366Q8N895 744 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 TERB1Q8NA31 727 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 CLEC18CQ8NCF0 446 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 TMEM161BQ8NDZ6 487 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 OR14K1Q8NGZ2 314 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 SNRNP27Q8WVK2 155 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 IGSF8Q969P0 613 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF669Q96BR6 464 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 SIPA1Q96FS4 1042 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PRR11Q96HE9 360 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 JAKMIP1Q96N16 626 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF578Q96N58 590 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 DEPDC7Q96QD5 511 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PLIN2Q99541 437 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 NUP58Q9BVL2 599 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 C22orf23Q9BZE7 217 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 MTG2Q9H4K7 406 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ZNF768Q9H5H4 540 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 RPF1Q9H9Y2 349 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 TUFT1Q9NNX1 390 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ASCL3Q9NQ33 180 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 KMT5AQ9NQR1 393 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 SPHK2Q9NRA0 654 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 TMEM30AQ9NV96 361 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 GALNT8Q9NY28 637 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 DPP3Q9NY33 737 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 TRPM5Q9NZQ8 1165 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PLEKHB1Q9UF11 243 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 L1RE1Q9UN81 338 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PLAAQ9Y263 795 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 DMRT1Q9Y5R6 373 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ATP23Q9Y6H3 246 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 SPTBN1Q01082 2364 aaKnown RBP3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 ICE1Q9Y2F5 2266 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 HIVEP1P15822 2718 aa3.13□□□□□ -1.91
CHMP4A-208ENST00000534106 PDCD11Q14690 1871 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TRAV20A0A0B4J274 112 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 FAM90A27PA6NNH2 459 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PP2D1A8MPX8 630 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 KPNA7A9QM74 516 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 F8VP50 259 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 MATN2O00339 956 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CLDN5O00501 218 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 SLC9A3R1O14745 358 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 PDPK1O15530 556 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 HOXC11O43248 304 aaPredicted RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 FAM189A1O60320 539 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CSO75390 466 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 DEXIO95424 95 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CTDNEP1O95476 244 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 OLFM2O95897 454 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 OAS1P00973 400 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 IGHV4-34P06331 123 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ADRB2P07550 413 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 ACADMP11310 421 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 RARGP13631 454 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 FDPSP14324 419 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 TYRP14679 529 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 GCFC2P16383 781 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CKMT2P17540 419 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 BMP5P22003 454 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 RPS6KB1P23443 525 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CD27P26842 260 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 OXTRP30559 389 aa3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 CCT6AP40227 531 aaKnown RBP3.12□□□□□ -1.91
CHMP4A-208ENST00000534106 LSSP48449 732 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms