RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MARVELD2Q8N4S9 558 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 KDM1BQ8NB78 822 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 OR9I1Q8NGQ6 314 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 HEXDCQ8WVB3 486 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 PCED1BQ96HM7 432 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 SLC2A13Q96QE2 648 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 CCDC28BQ9BUN5 200 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 MRPL1Q9BYD6 325 aaKnown RBP19.53■□□□□ 0.72
CAPN1-226ENST00000533820 SOX11P35716 441 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 PSMD7P51665 324 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 PRPSAP1Q14558 356 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 AGKQ53H12 422 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 RBM20Q5T481 1227 aaKnown RBP19.52■□□□□ 0.72
CAPN1-226ENST00000533820 NAPEPLDQ6IQ20 393 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 ZFP28Q8NHY6 868 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 LRTOMTQ8WZ04 291 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 DGCR14Q96DF8 476 aaKnown RBP19.52■□□□□ 0.72
CAPN1-226ENST00000533820 CENPOQ9BU64 300 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 MTF2Q9Y483 593 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-226ENST00000533820 IPPQ9Y573 584 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 SNX13Q9Y5W8 968 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 BRCA2P51587 3418 aa19.52■□□□□ 0.72
CAPN1-226ENST00000533820 C9JVG2 144 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 SMIM10L2AP0DMW4 78 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 SMIM10L2BP0DMW5 78 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 SLC1A2P43004 574 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 C6orf183Q5T699 404 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 LDB1Q86U70 411 aaPredicted RBP19.52■□□□□ 0.71
CAPN1-226ENST00000533820 EXT2Q93063 718 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 CNDP1Q96KN2 507 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 TRPV6Q9H1D0 765 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 IL1RL2Q9HB29 575 aa19.52■□□□□ 0.71
CAPN1-226ENST00000533820 RPL10P27635 214 aaKnown RBP19.51■□□□□ 0.71
CAPN1-226ENST00000533820 RAB10P61026 200 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 NSUN2Q08J23 767 aaKnown RBP eCLIP19.51■□□□□ 0.71
CAPN1-226ENST00000533820 ARL13BQ3SXY8 428 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SMYD5Q6GMV2 418 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 THOC7Q6I9Y2 204 aaKnown RBP19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SLC2A7Q6PXP3 512 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 ZMIZ2Q8NF64 920 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 MID2Q9UJV3 735 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 PLXNA1Q9UIW2 1896 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 ANKRD12Q6UB98 2062 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SMIM31A0A1B0GVY4 71 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 TREHO43280 583 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 DENRO43583 198 aaKnown RBP19.51■□□□□ 0.71
CAPN1-226ENST00000533820 HALP42357 657 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SLC12A2P55011 1212 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 PSME3P61289 254 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 COG7P83436 770 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SEMA3BQ13214 749 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SNX17Q15036 470 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 ZNF792Q3KQV3 632 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 GPRC5AQ8NFJ5 357 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 ZNF408Q9H9D4 720 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 DOLKQ9UPQ8 538 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 COL1A2P08123 1366 aa19.51■□□□□ 0.71
CAPN1-226ENST00000533820 SDHDO14521 159 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 H2AFYO75367 372 aaKnown RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 GSTT2P0CG29 244 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 GSTT2BP0CG30 244 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 COL6A2P12110 1019 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 MYO1HQ8N1T3 1032 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 FAM110BQ8TC76 370 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 PPWD1Q96BP3 646 aaKnown RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 HDAC11Q96DB2 347 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 SENP8Q96LD8 212 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 OSBPL2Q9H1P3 480 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 VTA1Q9NP79 307 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 HEMK1Q9Y5R4 338 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 MAGEB16A2A368 324 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 H3BSA7 217 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 MOCS2O96007 188 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 APOA4P06727 396 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 FAM58BPP0C7Q3 252 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 CDK4P11802 303 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 PCSK6P29122 969 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 GALNT2Q10471 571 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 CLEC6AQ6EIG7 209 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 FAM35AQ86V20 835 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 ZNF512Q96ME7 567 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 COQ10BQ9H8M1 238 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 LIN28AQ9H9Z2 209 aaKnown RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 SPON1Q9HCB6 807 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 UTP6Q9NYH9 597 aaKnown RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 TRHDEQ9UKU6 1024 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 TRIP12Q14669 1992 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 TTC3P53804 2025 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 BCAS2O75934 225 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-226ENST00000533820 GJA5P36382 358 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 PNPLA4P41247 253 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 PKN3Q6P5Z2 889 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 LPPQ93052 612 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 CIB1Q99828 191 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 TBL1YQ9BQ87 522 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 NDFIP2Q9NV92 336 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 TSC22D4Q9Y3Q8 395 aa19.5■□□□□ 0.71
CAPN1-226ENST00000533820 ACOT8O14734 319 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 ARNTP27540 789 aa19.49■□□□□ 0.71
CAPN1-226ENST00000533820 C1QTNF8P60827 252 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms