RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PROX2Q3B8N5 592 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 LRRC73Q5JTD7 316 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 CFAP58Q5T655 872 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 RFX8Q6ZV50 586 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 LUZP1Q86V48 1076 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 PSTKQ8IV42 348 aaKnown RBP15.63■□□□□ 0.09
CPSF1-211ENST00000533492 ARFGAP1Q8N6T3 406 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 DENND6BQ8NEG7 585 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 OR4C6Q8NH72 309 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 PEBP4Q96S96 227 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 KCTD15Q96SI1 283 aaPredicted RBP15.63■□□□□ 0.09
CPSF1-211ENST00000533492 KLF6Q99612 283 aaPredicted RBP15.63■□□□□ 0.09
CPSF1-211ENST00000533492 C1QTNF7Q9BXJ2 289 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 TRIM7Q9C029 511 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 SLC39A8Q9C0K1 460 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 LHX3Q9UBR4 397 aa15.63■□□□□ 0.09
CPSF1-211ENST00000533492 BZW2Q9Y6E2 419 aaKnown RBP15.63■□□□□ 0.09
CPSF1-211ENST00000533492 DMXL2Q8TDJ6 3036 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 SPTY2D1-AS1A0A0U1RR47 76 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 DFFAO00273 331 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 INSIG1O15503 277 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 PRAMEF11O60813 436 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 PALMO75781 387 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 ERCC2P18074 760 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 ACP1P24666 158 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 SUOXP51687 545 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 ZNF135P52742 658 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-211ENST00000533492 THOP1P52888 689 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 ELP6Q0PNE2 266 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 CAMK2BQ13554 666 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 FZD2Q14332 565 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 HES3Q5TGS1 186 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 PARGQ86W56 976 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 PAF1Q8N7H5 531 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 HCAR2Q8TDS4 363 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 CPLX3Q8WVH0 158 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 VOPP1Q96AW1 172 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 ISCUQ9H1K1 167 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 SUV39H2Q9H5I1 410 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 ZWILCHQ9H900 591 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 SP110Q9HB58 689 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 EVA1BQ9NVM1 165 aa15.62■□□□□ 0.09
CPSF1-211ENST00000533492 CFAP47Q6ZTR5 3102 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 A0A1W2PQJ5 194 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 SCAMP1O15126 338 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 SPINT1O43278 529 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 LRCH4O75427 683 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 PIGNO95427 931 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 CSF2P04141 144 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 ITIH2P19823 946 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 PCK1P35558 622 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 HCAR3P49019 387 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 CLDN6P56747 220 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 E2F1Q01094 437 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 TARDBPQ13148 414 aaKnown RBP eCLIP15.61■□□□□ 0.09
CPSF1-211ENST00000533492 PTK2BQ14289 1009 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 ACAP1Q15027 740 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 SYN2Q92777 582 aaPredicted RBP15.61■□□□□ 0.09
CPSF1-211ENST00000533492 CENPTQ96BT3 561 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 ZNF641Q96N77 438 aaPredicted RBP15.61■□□□□ 0.09
CPSF1-211ENST00000533492 WRAP53Q9BUR4 548 aaKnown RBP15.61■□□□□ 0.09
CPSF1-211ENST00000533492 DUSP23Q9BVJ7 150 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 CINPQ9BW66 212 aaPredicted RBP15.61■□□□□ 0.09
CPSF1-211ENST00000533492 PDFQ9HBH1 243 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 GPR27Q9NS67 375 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 NLGN3Q9NZ94 848 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 DKK4Q9UBT3 224 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 ZZEF1O43149 2961 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 ACACAQ13085 2346 aa15.61■□□□□ 0.09
CPSF1-211ENST00000533492 CHD6Q8TD26 2715 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 H3BRJ5 948 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 NEBLO76041 1014 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 SERPING1P05155 500 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 NME1P15531 152 aaKnown RBP15.6■□□□□ 0.09
CPSF1-211ENST00000533492 JUNDP17535 347 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 ARL4AP40617 200 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 DUSP3P51452 185 aaPredicted RBP15.6■□□□□ 0.09
CPSF1-211ENST00000533492 PFN3P60673 137 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 ZBED6P86452 979 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 UGP2Q16851 508 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 TMEM52BQ4KMG9 183 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 BOLA3Q53S33 107 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 ERAP2Q6P179 960 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 SRLQ86TD4 932 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 LZTR1Q8N653 840 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 BTN2A2Q8WVV5 523 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 IQCDQ96DY2 449 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 TUBGCP5Q96RT8 1024 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 ATP13A3Q9H7F0 1226 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 CAAP1Q9H8G2 361 aa15.6■□□□□ 0.09
CPSF1-211ENST00000533492 CWC15Q9P013 229 aaKnown RBP15.6■□□□□ 0.09
CPSF1-211ENST00000533492 RALYQ9UKM9 306 aaKnown RBP15.6■□□□□ 0.09
CPSF1-211ENST00000533492 ANKRD11Q6UB99 2663 aaPredicted RBP15.6■□□□□ 0.09
CPSF1-211ENST00000533492 K7ESM1 405 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 GIMD1P0DJR0 217 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CKMT1AP12532 417 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 PTMSP20962 102 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 SERPINA4P29622 427 aa15.59■□□□□ 0.09
CPSF1-211ENST00000533492 CSNK1DP48730 415 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms