RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SLC25A51Q9H1U9 297 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 SGK2Q9HBY8 427 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 GLOD4Q9HC38 313 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 DKK3Q9UBP4 350 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 FZD4Q9ULV1 537 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 HCN4Q9Y3Q4 1203 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 PCDHGC4Q9Y5F7 938 aa11.36□□□□□ -0.59
TRAPPC4-211ENST00000533012 NUP205Q92621 2012 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 IGHV1OR15-9A0A0B4J2B8 117 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 GOLGA6L10A0A0M3HER8 536 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 C16orf96A6NNT2 1141 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 SLC7A4O43246 635 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 OPHN1O60890 802 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 SOCS5O75159 536 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 GCATO75600 419 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ITGAVP06756 1048 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 CA4P22748 312 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 XPAP23025 273 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 DRD3P35462 400 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ACTN2P35609 894 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 CD86P42081 329 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 NEK3P51956 506 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 METAP1P53582 386 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 LMNB2Q03252 620 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 NIPAL4Q0D2K0 466 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 TCF15Q12870 199 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 PRPSAP1Q14558 356 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 OASLQ15646 514 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 FAM182AQ5T1J6 154 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ITPRIPL1Q6GPH6 555 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 BRAT1Q6PJG6 821 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 CEP68Q76N32 757 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 GSTA5Q7RTV2 222 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 FAM160A2Q8N612 972 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 FRMD1Q8N878 549 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 PRELID2Q8N945 189 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 OR14C36Q8NHC7 312 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ATL2Q8NHH9 583 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 PDCD6IPQ8WUM4 868 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ATOH1Q92858 354 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 RAB7BQ96AH8 199 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 VOPP1Q96AW1 172 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 IMP4Q96G21 291 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 SPATA13Q96N96 652 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 FCRL5Q96RD9 977 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 KDM4CQ9H3R0 1056 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 WSB2Q9NYS7 404 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 RSPH14Q9UHP6 348 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 FEZ2Q9UHY8 353 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 RAI2Q9Y5P3 530 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 CHD5Q8TDI0 1954 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ATG2BQ96BY7 2078 aa11.35□□□□□ -0.59
TRAPPC4-211ENST00000533012 ZDBF2Q9HCK1 2354 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 MUC22E2RYF6 1773 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 CUL9Q8IWT3 2517 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 LRRC72A6NJI9 287 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 PLK4O00444 970 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 FANCGO15287 622 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 LILRB5O75023 590 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 ADRB3P13945 408 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 TIMP2P16035 220 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 NFKB1P19838 968 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 ACSL1P33121 698 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 CD68P34810 354 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 SUOXP51687 545 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 SKOR1P84550 965 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 SRSF5Q13243 272 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 SIM2Q14190 667 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 CYP1B1Q16678 543 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 UGP2Q16851 508 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 PARP6Q2NL67 630 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 ARMC12Q5T9G4 340 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 ARHGEF18Q6ZSZ5 1173 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 PRPF39Q86UA1 669 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 NDUFAF2Q8N183 169 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 CCDC89Q8N998 374 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 CCDC110Q8TBZ0 833 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 NSMCE3Q96MG7 304 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 PPP1R2P1Q96PQ5 205 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 RBM15Q96T37 977 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 GPR174Q9BXC1 333 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 CD93Q9NPY3 652 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 SMARCAL1Q9NZC9 954 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 SERGEFQ9UGK8 458 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 PHTF1Q9UMS5 762 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 ARIH1Q9Y4X5 557 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 PCDHB9Q9Y5E1 797 aa11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-211ENST00000533012 MYO18AQ92614 2054 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3DA0A087WVF3 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3IA0A087WXS9 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3EA0A087X179 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3KA0A087X1G2 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TSPAN11A1L157 253 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3FA6NER0 549 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 TBC1D3LB9A6J9 549 aa11.33□□□□□ -0.6
TRAPPC4-211ENST00000533012 NEMP1O14524 444 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms