RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SH2D4AQ9H788 454 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 HOXC10Q9NYD6 342 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 SWAP70Q9UH65 585 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 ZNF236Q9UL36 1845 aa7.62□□□□□ -1.19
CSDE1-213ENST00000530784 A0A0G2JMZ2 1700 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 SZT2Q5T011 3432 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ZBED9Q6R2W3 1325 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 EMSYQ7Z589 1322 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 MYH1P12882 1939 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 LOC105369274A0A096LPK9 316 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 LOC102723532A0A0G2JNH3 316 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 NKX2-8O15522 239 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 DNPH1O43598 174 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ASNA1O43681 348 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 STRNO43815 780 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 RPP40O75818 363 aaKnown RBP7.61□□□□□ -1.19
CSDE1-213ENST00000530784 FLOT1O75955 427 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 MBD4O95243 580 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 PEPDP12955 493 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 CYBAP13498 195 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 AKR1A1P14550 325 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ME1P48163 572 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ICA1Q05084 483 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ANXA2RQ3ZCQ2 193 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ZNF260Q3ZCT1 412 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ANKRD40Q6AI12 368 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 RINT1Q6NUQ1 792 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 TRABD2AQ86V40 505 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 RPAP2Q8IXW5 612 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ADGRF4Q8IZF3 695 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 OR4N4Q8N0Y3 316 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 ARL14EPQ8N8R7 260 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-213ENST00000530784 TRPV1Q8NER1 839 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 WDR60Q8WVS4 1066 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 KAT2BQ92831 832 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 TRMOQ9BU70 441 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 MROH8Q9H579 483 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 PRDM16Q9HAZ2 1276 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 HS3ST3B1Q9Y662 390 aa7.61□□□□□ -1.19
CSDE1-213ENST00000530784 MYO5AQ9Y4I1 1855 aaKnown RBP7.61□□□□□ -1.19
CSDE1-213ENST00000530784 CEP290O15078 2479 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 KBTBD13C9JR72 458 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 WDR46O15213 610 aaKnown RBP7.6□□□□□ -1.19
CSDE1-213ENST00000530784 SEPT4O43236 478 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 PRKAB2O43741 272 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 UGDHO60701 494 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 AKR1B1P15121 316 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 AKT1P31749 480 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 ADD2P35612 726 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 SLC37A1P57057 533 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 WDR93Q6P2C0 686 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 ZNF474Q6S9Z5 364 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-213ENST00000530784 TECPR1Q7Z6L1 1165 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 NRSN1Q8IZ57 195 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 SPICE1Q8N0Z3 855 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 ARFGAP1Q8N6T3 406 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 STYXQ8WUJ0 223 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 DYNLL2Q96FJ2 89 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 VCPIP1Q96JH7 1222 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 VCPKMTQ9H867 229 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 ATP8A2Q9NTI2 1148 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 PAG1Q9NWQ8 432 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 MTMR10Q9NXD2 777 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 DDX19BQ9UMR2 479 aa7.6□□□□□ -1.19
CSDE1-213ENST00000530784 MAGED2Q9UNF1 606 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-213ENST00000530784 FRMPD3Q5JV73 1810 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 GOLGA6L3A6NEY3 463 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 FFAR2O15552 330 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 PPP6R2O75170 966 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 B4GALNT1Q00973 533 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 KIAA1755Q5JYT7 1200 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 C12orf60Q5U649 245 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 LIPMQ5VYY2 423 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 ANO1Q5XXA6 986 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 SRFBP1Q8NEF9 429 aaKnown RBP7.59□□□□□ -1.19
CSDE1-213ENST00000530784 ABHD14AQ9BUJ0 271 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 TP63Q9H3D4 680 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-213ENST00000530784 BOLA2Q9H3K6 86 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 CHMP4BQ9H444 224 aaKnown RBP7.59□□□□□ -1.19
CSDE1-213ENST00000530784 OBP2BQ9NPH6 170 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 DOCK3Q8IZD9 2030 aa7.59□□□□□ -1.19
CSDE1-213ENST00000530784 LAMA3Q16787 3333 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 KIF28PB7ZC32 967 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 F8W810 466 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 SLC25A27O95847 323 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 EEF2P13639 858 aaKnown RBP7.58□□□□□ -1.2
CSDE1-213ENST00000530784 RPL15P61313 204 aaKnown RBP7.58□□□□□ -1.2
CSDE1-213ENST00000530784 SPARCL1Q14515 664 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 KCTD2Q14681 263 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 BRD3Q15059 726 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 PGM5Q15124 567 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 TRIM60Q495X7 471 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 ZSCAN25Q6NSZ9 544 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 SLC39A5Q6ZMH5 540 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 TOGARAM2Q6ZUX3 1019 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 GATAD2AQ86YP4 633 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 ZFPM2Q8WW38 1151 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 REXO5Q96IC2 774 aaKnown RBP7.58□□□□□ -1.2
CSDE1-213ENST00000530784 TUBB6Q9BUF5 446 aa7.58□□□□□ -1.2
CSDE1-213ENST00000530784 CCDC134Q9H6E4 229 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms