RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 RXFP2Q8WXD0 754 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ANP32BQ92688 251 aaKnown RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ALG14Q96F25 216 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 RPRD1AQ96P16 312 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 CCNL2Q96S94 520 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 SIK2Q9H0K1 926 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 OSGEPQ9NPF4 335 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 PRSS16Q9NQE7 514 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ITM2CQ9NQX7 267 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 WSB2Q9NYS7 404 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 AIPL1Q9NZN9 384 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ADAM22Q9P0K1 906 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 ATXN7L1Q9ULK2 861 aaPredicted RBP8.67□□□□□ -1.02
SSBP3-212ENST00000528930 VANGL2Q9ULK5 521 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 SNX10Q9Y5X0 201 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 SLCO1B1Q9Y6L6 691 aa8.67□□□□□ -1.02
SSBP3-212ENST00000528930 DOCK9Q9BZ29 2069 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SCN8AQ9UQD0 1980 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 IGLV3-10A0A075B6K4 115 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SIGLEC16A6NMB1 481 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SHISA8B8ZZ34 492 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SYNCRIPO60506 623 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 CNTN5O94779 1100 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 MT-CO3P00414 261 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SERPINC1P01008 464 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ASLP04424 464 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 CCDC172P0C7W6 258 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 KRT3P12035 628 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 PDGFRAP16234 1089 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 RFC1P35251 1148 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 PRKCIP41743 596 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 CTSKP43235 329 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 PTPN9P43378 593 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 GRIA4P48058 902 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ATP11AP98196 1134 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 IL9RQ01113 521 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SLC12A1Q13621 1099 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 C15orf59Q2T9L4 293 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 FNDC3BQ53EP0 1204 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ALFQ53S48 1182 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 FIGNQ5HY92 759 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 RABGAP1LQ5R372 815 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ACAD10Q6JQN1 1059 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 WDR59Q6PJI9 974 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SND1Q7KZF4 910 aaKnown RBP eCLIP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 PTRH1Q86Y79 214 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 CCDC117Q8IWD4 279 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 KDM1BQ8NB78 822 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 C3orf20Q8ND61 904 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 OR2T3Q8NH03 318 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 CENPIQ92674 756 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SGF29Q96ES7 293 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SIPA1Q96FS4 1042 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 TOE1Q96GM8 510 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 C1orf74Q96LT6 269 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 HAPLN3Q96S86 360 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 EDEM3Q9BZQ6 932 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ADNPQ9H2P0 1102 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 MTG2Q9H4K7 406 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 HAUS4Q9H6D7 363 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 TMEM51Q9NW97 253 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 TAS2R14Q9NYV8 317 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 USP36Q9P275 1121 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF212Q9UDV6 495 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SUN2Q9UH99 717 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 EIF2B4Q9UI10 523 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 SLCO3A1Q9UIG8 710 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ERVW-1Q9UQF0 538 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ANKRD6Q9Y2G4 727 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 TBC1D30Q9Y2I9 924 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 OR51B4Q9Y5P0 310 aa8.66□□□□□ -1.02
SSBP3-212ENST00000528930 RP1L1Q8IWN7 2480 aaPredicted RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
SSBP3-212ENST00000528930 AKAP9Q99996 3911 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 ITIH6Q6UXX5 1313 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 DOCK4Q8N1I0 1966 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 A0A1B0GTQ1 180 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 TTC34A8MYJ7 566 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 DYNC1I1O14576 645 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 KCNK3O14649 394 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 DFNA5O60443 496 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 CLDN11O75508 207 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 MOCS3O95396 460 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 IGLV3-19P01714 112 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 CALB1P05937 261 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 SRPRAP08240 638 aaKnown RBP8.65□□□□□ -1.02
SSBP3-212ENST00000528930 TNFAIP3P21580 790 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 SDC4P31431 198 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 GPC1P35052 558 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 ADRA1BP35368 520 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 NUMBP49757 651 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 TPMTP51580 245 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 CDH4P55283 916 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 HDAC4P56524 1084 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 UBASH3AP57075 661 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 RPS14P62263 151 aaKnown RBP8.65□□□□□ -1.02
SSBP3-212ENST00000528930 ECT2LQ008S8 904 aa8.65□□□□□ -1.02
SSBP3-212ENST00000528930 CDO1Q16878 200 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms