RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MFHAS1Q9Y4C4 1052 aa20.95■□□□□ 0.94
SDCBP-209ENST00000522243 LRRK1Q38SD2 2015 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 SPTY2D1-AS1A0A0U1RR47 76 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 ARHGAP42A6NI28 874 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 PRAMEF11O60813 436 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 NEBLO76041 1014 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 TM7SF2O76062 418 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 ERCC2P18074 760 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 XPAP23025 273 aaPredicted RBP20.94■□□□□ 0.94
SDCBP-209ENST00000522243 ACP1P24666 158 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 FANCCQ00597 558 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 TARDBPQ13148 414 aaKnown RBP eCLIP20.94■□□□□ 0.94
SDCBP-209ENST00000522243 TDRD12Q587J7 1177 aaKnown RBP20.94■□□□□ 0.94
SDCBP-209ENST00000522243 RFX8Q6ZV50 586 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 CYP4V2Q6ZWL3 525 aaPredicted RBP20.94■□□□□ 0.94
SDCBP-209ENST00000522243 FNIP1Q8TF40 1166 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 ASB12Q8WXK4 309 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 IFT43Q96FT9 208 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 CPEB1Q9BZB8 566 aaKnown RBP20.94■□□□□ 0.94
SDCBP-209ENST00000522243 DONSONQ9NYP3 566 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 DKK3Q9UBP4 350 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 KLF15Q9UIH9 416 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 LHX6Q9UPM6 363 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 ANKRD36A6QL64 1941 aa20.94■□□□□ 0.94
SDCBP-209ENST00000522243 DFFAO00273 331 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 LRCH4O75427 683 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 IGFALSP35858 605 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 RGRP47804 291 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 PFN3P60673 137 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 HNRNPKP61978 463 aaKnown RBP eCLIP20.93■□□□□ 0.94
SDCBP-209ENST00000522243 ILKQ13418 452 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 ARHGAP36Q6ZRI8 547 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 PARGQ86W56 976 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 ARHGAP12Q8IWW6 846 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 NPWQ8N729 165 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 DENND6BQ8NEG7 585 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 CPLX3Q8WVH0 158 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 CENPTQ96BT3 561 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 APOLD1Q96LR9 279 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.93■□□□□ 0.94
SDCBP-209ENST00000522243 ISCUQ9H1K1 167 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 SUV39H2Q9H5I1 410 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 COQ6Q9Y2Z9 468 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 SCINQ9Y6U3 715 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 ADAMTS20P59510 1910 aa20.93■□□□□ 0.94
SDCBP-209ENST00000522243 NEMP2A6NFY4 417 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 EIF3CLB5ME19 914 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 CSF2P04141 144 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 ALPPL2P10696 532 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 NME1P15531 152 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 UBASH3AP57075 661 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 TPM4P67936 248 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 SEMG2Q02383 582 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 EIF2B5Q13144 721 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 KLHL40Q2TBA0 621 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 FIGNQ5HY92 759 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 HGSNATQ68CP4 663 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 CAMK1DQ8IU85 385 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 TP53INP2Q8IXH6 220 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 ZNF548Q8NEK5 533 aaPredicted RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 EIF3CQ99613 913 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 SP110Q9HB58 689 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 MRPL47Q9HD33 250 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 MBNL1Q9NR56 388 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 NLGN3Q9NZ94 848 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 CWC15Q9P013 229 aaKnown RBP20.92■□□□□ 0.94
SDCBP-209ENST00000522243 DKK4Q9UBT3 224 aa20.92■□□□□ 0.94
SDCBP-209ENST00000522243 H3BM21 787 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 K7ESM1 405 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 SCAMP1O15126 338 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 BUB1BO60566 1050 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-209ENST00000522243 PALMO75781 387 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 PRKCGP05129 697 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 MYBL1P10243 752 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 TCF4P15884 667 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 JUNDP17535 347 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 THOP1P52888 689 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 INSM1Q01101 510 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-209ENST00000522243 SMTNL2Q2TAL5 461 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 TMEM52BQ4KMG9 183 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 RBFAQ8N0V3 343 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 TP53I13Q8NBR0 393 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-209ENST00000522243 TSEN2Q8NCE0 465 aaKnown RBP20.91■□□□□ 0.94
SDCBP-209ENST00000522243 HNRNPLLQ8WVV9 542 aaKnown RBP20.91■□□□□ 0.94
SDCBP-209ENST00000522243 TRIM11Q96F44 468 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 TCEAL2Q9H3H9 227 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-209ENST00000522243 ZWILCHQ9H900 591 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 GPSM3Q9Y4H4 160 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 ASPMQ8IZT6 3477 aa20.91■□□□□ 0.94
SDCBP-209ENST00000522243 IL1R2P27930 398 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 PBX1P40424 430 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 UGP2Q16851 508 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 CFAP58Q5T655 872 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 AFMIDQ63HM1 303 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 SRLQ86TD4 932 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 ZSWIM9Q86XI8 627 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 LMX1AQ8TE12 382 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 CINPQ9BW66 212 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-209ENST00000522243 PCDH12Q9NPG4 1184 aa20.9■□□□□ 0.94
SDCBP-209ENST00000522243 CLCA2Q9UQC9 943 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms