RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 FZD2Q14332 565 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 C16orf72Q14CZ0 275 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 E2F5Q15329 346 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 NR6A1Q15406 480 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC18A3Q16572 532 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ZRANB3Q5FWF4 1079 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 C1orf220Q5T0J3 134 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 TMCO3Q6UWJ1 677 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SND1Q7KZF4 910 aaKnown RBP eCLIP7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CHST9Q7L1S5 443 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 HS2ST1Q7LGA3 356 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CTAGE6Q86UF2 777 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CTAGE4Q8IX94 777 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 C12orf56Q8IXR9 622 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SDR16C5Q8N3Y7 309 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 TOP6BLQ8N6T0 577 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 C1orf127Q8N9H9 656 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 GLIS1Q8NBF1 620 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 PLEKHO2Q8TD55 490 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 IFT43Q96FT9 208 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 CAPZA3Q96KX2 299 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 RHOXF2Q9BQY4 288 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 PACSIN1Q9BY11 444 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC2A11Q9BYW1 496 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SEMA6CQ9H3T2 930 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 RUBCNLQ9H714 662 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 ARGLU1Q9NWB6 273 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 DNAJC28Q9NX36 388 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 RRN3Q9NYV6 651 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 NCKIPSDQ9NZQ3 722 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 LSM7Q9UK45 103 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 NUDT5Q9UKK9 219 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 RAB21Q9UL25 225 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 NENFQ9UMX5 172 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 PLA2G4CQ9UP65 541 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 AGAP1Q9UPQ3 857 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 FRMD4BQ9Y2L6 1034 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 SNX9Q9Y5X1 595 aa7.47□□□□□ -1.21
CTNNA1-227ENST00000521387 LOC101059948A0A1B0GTJ6 334 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 MKRN2OSH3BPM6 223 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 BUB1O43683 1085 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 EXOC3O60645 756 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 GCATO75600 419 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 RTN3O95197 1032 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CSF2P04141 144 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 RPLP0P05388 317 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SNRPB2P08579 225 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 DLDP09622 509 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 FURINP09958 794 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PNMA6AP0CW24 399 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 NME1P15531 152 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PRLRP16471 622 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 HOXD9P28356 352 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PNPLA4P41247 253 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PLA2G4AP47712 749 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC5A3P53794 718 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 NCKAP1LP55160 1127 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 HNRNPKP61978 463 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 DLG4P78352 724 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PTK2Q05397 1052 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 PDE4CQ08493 712 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 FGL2Q14314 439 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 BRD3Q15059 726 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 KYAT1Q16773 422 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 HNRNPA1L2Q32P51 320 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CBWD6Q4V339 395 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 MDH1BQ5I0G3 518 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CBWD3Q5JTY5 395 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CBWD5Q5RIA9 395 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 TPRG1LQ5T0D9 272 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 MBLAC2Q68D91 279 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CRELD2Q6UXH1 353 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 GCNT7Q6ZNI0 430 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CDH24Q86UP0 819 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 TRIM69Q86WT6 500 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 DNAAF5Q86Y56 855 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SLITRK4Q8IW52 837 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 UNC5BQ8IZJ1 945 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CACNA2D3Q8IZS8 1091 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 RNF10Q8N5U6 811 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 TRIM58Q8NG06 486 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 LMO3Q8TAP4 145 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 GOLGA5Q8TBA6 731 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 KLK6Q92876 244 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 NAT6Q93015 286 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 ZNF560Q96MR9 790 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 TMEM74Q96NL1 305 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SPAG5Q96R06 1193 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 GFM1Q96RP9 751 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CBWD1Q9BRT8 395 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 TIPINQ9BVW5 301 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 CALN1Q9BXU9 219 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 B3GNT5Q9BYG0 378 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 SPRY4Q9C004 299 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 NACA2Q9H009 215 aa7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 INTS2Q9H0H0 1204 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-227ENST00000521387 TCEAL2Q9H3H9 227 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms