RNA–Protein interactions for RNA: ENST00000519975.1

PCMTD1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, human

TSL 2

Gene PCMTD1, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMTD1-204	ENST00000519975	TCRBV21S2A2	A0A5A6	115 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	KRT87P	A6NCN2	255 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	C3orf70	A6NLC5	250 aa	Predicted RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	OR6C76	A6NM76	312 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	EIF3CL	B5ME19	914 aa	Known RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	IFNL4	K9M1U5	179 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SNAP23	O00161	211 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ZNF213	O14771	459 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PROM1	O43490	865 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GCNT3	O95395	438 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	VNN1	O95497	513 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ALDOA	P04075	364 aa	Known RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	KRT10	P13645	584 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	KCNA2	P16389	499 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	IGFBP2	P18065	325 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	MMP8	P22894	467 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PRPH2	P23942	346 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	NDUFV1	P49821	464 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	RPS6KA3	P51812	740 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	STARD6	P59095	220 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SCN1B	Q07699	218 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GRAP	Q13588	217 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ITGA7	Q13683	1181 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ALKBH1	Q13686	389 aa	Known RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PTK6	Q13882	451 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	TUBB2A	Q13885	445 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	MEP1B	Q16820	701 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ST3GAL2	Q16842	350 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	AP5B1	Q2VPB7	878 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	NHSL2	Q5HYW2	709 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	RBM20	Q5T481	1227 aa	Known RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	FAM171A1	Q5VUB5	890 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ACSM6	Q6P461	480 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ERN2	Q76MJ5	926 aa	Known RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	RPAIN	Q86UA6	219 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	FAM83A	Q86UY5	434 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SPATA20	Q8TB22	786 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	DENND1A	Q8TEH3	1009 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ATG4A	Q8WYN0	398 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	N4BP2L2	Q92802	583 aa	Predicted RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GTF3C6	Q969F1	213 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	RUNDC3B	Q96NL0	473 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	TUBB2B	Q9BVA1	445 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	HDHD5	Q9BXW7	423 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	INTS10	Q9NVR2	710 aa	Known RBP	4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	OGFR	Q9NZT2	677 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SH3BGRL2	Q9UJC5	107 aa		4.99	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SPATA31A3	Q5VYP0	1347 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ARHGEF37	A1IGU5	675 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975		A8MVJ9	347 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	QSOX1	O00391	747 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	NDC80	O14777	642 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PRPSAP2	O60256	369 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	LPXN	O60711	386 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SOCS5	O75159	536 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	IPO7	O95373	1038 aa	Known RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PNP	P00491	289 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CYP4B1	P13584	511 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	AGA	P20933	346 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CD72	P21854	359 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	TNFRSF8	P28908	595 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	HOXA13	P31271	388 aa	Predicted RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	FMO4	P31512	558 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	MC5R	P33032	325 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GJC1	P36383	396 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PIP4K2A	P48426	406 aa	Predicted RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CAMP	P49913	170 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ANXA11	P50995	505 aa	Known RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	PNLIPRP2	P54317	469 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CSE1L	P55060	971 aa	Known RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	TUBB4B	P68371	445 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SP2	Q02086	613 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	TAP1	Q03518	808 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	RPA4	Q13156	261 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CBX3	Q13185	183 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	TUBB3	Q13509	450 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	IL13RA2	Q14627	380 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GXYLT1	Q4G148	440 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	WDR93	Q6P2C0	686 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	FBXO42	Q6P3S6	717 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	LINC00696	Q6ZRV3	163 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	MMP21	Q8N119	569 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	C11orf65	Q8NCR3	313 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ZNF540	Q8NDQ6	660 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	GLMP	Q8WWB7	406 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CORO2A	Q92828	525 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	RBM18	Q96H35	190 aa	Known RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	NEU1	Q99519	415 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	SLC25A23	Q9BV35	468 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	KIFC3	Q9BVG8	833 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	CDCP1	Q9H5V8	836 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	MRPL44	Q9H9J2	332 aa	Known RBP	4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	IL1RAPL2	Q9NP60	686 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	ABI3	Q9P2A4	366 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	AMACR	Q9UHK6	382 aa		4.98	□□□□□ -1.61
PCMTD1-204	ENST00000519975	LOC102723996	A0A087X1L8	192 aa		4.97	□□□□□ -1.61
PCMTD1-204	ENST00000519975	LRRD1	A4D1F6	860 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms