RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 SRGAP2O75044 1071 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ATG13O75143 517 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KHDRBS3O75525 346 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MED6O75586 246 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRDM1O75626 825 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TRPA1O75762 1119 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF189O75820 626 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DNAJB5O75953 348 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LY6HO94772 140 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ERLIN2O94905 339 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FBXO21O94952 628 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLCO2B1O94956 709 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SOX30O94993 753 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SEMA3DO95025 777 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RCBTB2O95199 551 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PDE8BO95263 885 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PGLSO95336 258 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PGM3O95394 542 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LCA5LO95447 670 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SEC24AO95486 1093 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 VNN2O95498 520 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF682O95780 498 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DDAH2O95865 285 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TGFAP01135 160 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IGLV2-23P01705 113 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CRYAAP02489 173 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TRGV3P03979 118 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OPN1MWP04001 364 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HMGCRP04035 888 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 THY1P04216 161 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ATP1A1P05023 1023 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PDHA1P08559 390 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MRPL3P09001 348 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ATXN1LP0C7T5 689 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OPN1MW2P0DN77 364 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OPN1MW3P0DN78 364 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD37P11049 281 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACADMP11310 421 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NCAM1P13591 858 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD46P15529 392 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PDE6AP16499 860 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZFXP17010 805 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HOXB8P17481 243 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TCP1P17987 556 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BCKDHBP21953 392 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FDXRP22570 491 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FCARP24071 287 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EDNRBP24530 442 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PTAFRP25105 342 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PTPN3P26045 913 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MARK3P27448 753 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARNTP27540 789 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MSX1P28360 303 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HTR1FP30939 366 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FMO4P31512 558 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SHMT1P34896 483 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPRR1AP35321 89 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SOX5P35711 763 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SOX6P35712 828 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LONP1P36776 959 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TXLNAP40222 546 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MLH1P40692 756 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ETV3P41162 512 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GRIA1P42261 906 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HALP42357 657 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TNFRSF4P43489 277 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PHKA2P46019 1235 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLCO1A2P46721 670 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CSNK1DP48730 415 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAPKAPK2P49137 400 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCYT1AP49585 367 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CSNK1EP49674 416 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CEBPDP49716 269 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BLKP51451 505 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MECP2P51608 486 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CLCN3P51790 818 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GPR143P51810 404 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RABGGTBP53611 331 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GALCP54803 685 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 P2RX3P56373 397 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RTP1P59025 263 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TAS2R38P59533 333 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RAC3P60763 192 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RPS29P62273 56 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RACK1P63244 317 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BLOC1S1P78537 153 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MRPS35P82673 323 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARHGAP4P98171 946 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC6A3Q01959 620 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TLE2Q04725 743 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DNM1Q05193 864 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PPATQ06203 517 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF816Q0VGE8 651 aaPredicted RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PMPCAQ10713 525 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FUT5Q11128 374 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 STRN3Q13033 797 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PSG7Q13046 419 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MRPL28Q13084 256 aaKnown RBP-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LCP2Q13094 533 aa-0.72□□□□□ -2.52
SCARNA20.2-201ENST00000516052 USP4Q13107 963 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms