RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 TAF1BQ53T94 588 aaPredicted RBP23.15■■□□□ 1.3
SMAD5-207ENST00000511116 PRRT3Q5FWE3 981 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 MACC1Q6ZN28 852 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 RYBPQ8N488 228 aaPredicted RBP23.15■■□□□ 1.3
SMAD5-207ENST00000511116 TP53I13Q8NBR0 393 aaPredicted RBP23.15■■□□□ 1.3
SMAD5-207ENST00000511116 GLMNQ92990 594 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 NTAN1Q96AB6 310 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 MAGEB5Q9BZ81 275 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 CLPBQ9H078 707 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 DNAI1Q9UI46 699 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 HPCAL4Q9UM19 191 aa23.15■■□□□ 1.3
SMAD5-207ENST00000511116 MYO18BQ8IUG5 2567 aa23.14■■□□□ 1.3
SMAD5-207ENST00000511116 K7ENP7 123 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 NTN3O00634 580 aaPredicted RBP23.14■■□□□ 1.29
SMAD5-207ENST00000511116 RAMP2O60895 175 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 SDC4P31431 198 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 THOP1P52888 689 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 HDAC4P56524 1084 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 GSCP56915 257 aaPredicted RBP23.14■■□□□ 1.29
SMAD5-207ENST00000511116 RWDD4Q6NW29 188 aaKnown RBP23.14■■□□□ 1.29
SMAD5-207ENST00000511116 INO80CQ6PI98 192 aaPredicted RBP23.14■■□□□ 1.29
SMAD5-207ENST00000511116 GDPD4Q6W3E5 623 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 CASKIN2Q8WXE0 1202 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 TBC1D31Q96DN5 1066 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 CCDC97Q96F63 343 aaPredicted RBP23.14■■□□□ 1.29
SMAD5-207ENST00000511116 SEMA4CQ9C0C4 833 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 TTYH3Q9C0H2 523 aa23.14■■□□□ 1.29
SMAD5-207ENST00000511116 NOL6Q9H6R4 1146 aaKnown RBP23.14■■□□□ 1.29
SMAD5-207ENST00000511116 PMS2P1A4D2B8 440 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 MUSKO15146 869 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 YY2O15391 372 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 TM7SF2O76062 418 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 TMCC1O94876 653 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 PLEKP08567 350 aaPredicted RBP23.13■■□□□ 1.29
SMAD5-207ENST00000511116 CHRNB2P17787 502 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 ADKP55263 362 aaKnown RBP23.13■■□□□ 1.29
SMAD5-207ENST00000511116 FMO1Q01740 532 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 CDR2Q01850 454 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 PTP4A2Q12974 167 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 CDO1Q16878 200 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 INO80DQ53TQ3 878 aaPredicted RBP23.13■■□□□ 1.29
SMAD5-207ENST00000511116 ATXN7L2Q5T6C5 722 aaPredicted RBP23.13■■□□□ 1.29
SMAD5-207ENST00000511116 VPS36Q86VN1 386 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 WDR36Q8NI36 951 aaKnown RBP23.13■■□□□ 1.29
SMAD5-207ENST00000511116 JOSD2Q8TAC2 188 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 SLC20A1Q8WUM9 679 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 GDAP1L1Q96MZ0 367 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 C1QTNF7Q9BXJ2 289 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 SLC13A1Q9BZW2 595 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 GANQ9H2C0 597 aa23.13■■□□□ 1.29
SMAD5-207ENST00000511116 MBNL1Q9NR56 388 aaKnown RBP23.13■■□□□ 1.29
SMAD5-207ENST00000511116 LRP4O75096 1905 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 CASC3O15234 703 aaKnown RBP23.12■■□□□ 1.29
SMAD5-207ENST00000511116 MMP20O60882 483 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 ANXA6P08133 673 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 TIMP2P16035 220 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 TSHRP16473 764 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 EIF4A3P38919 411 aaKnown RBP23.12■■□□□ 1.29
SMAD5-207ENST00000511116 PEX5P50542 639 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 SUOXP51687 545 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 C1orf61Q13536 156 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 LVRNQ6Q4G3 990 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 CRTC1Q6UUV9 634 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 TTC7BQ86TV6 843 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 CCDC185Q8N715 623 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 GPT2Q8TD30 523 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 LIN37Q96GY3 246 aaPredicted RBP23.12■■□□□ 1.29
SMAD5-207ENST00000511116 EPAS1Q99814 870 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 CCDC3Q9BQI4 270 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 PADI4Q9UM07 663 aa23.12■■□□□ 1.29
SMAD5-207ENST00000511116 LRRK1Q38SD2 2015 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 CCDC187A0A096LP49 1063 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 J3QKU1 62 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 ITGA2BP08514 1039 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 TMEM52BQ4KMG9 183 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 HSP90AA4PQ58FG1 418 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 LEKR1Q6ZMV7 388 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 SDR16C5Q8N3Y7 309 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 FSTL5Q8N475 847 aaPredicted RBP23.11■■□□□ 1.29
SMAD5-207ENST00000511116 ARL14Q8N4G2 192 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 RTL3Q8N8U3 475 aaKnown RBP23.11■■□□□ 1.29
SMAD5-207ENST00000511116 HCAR2Q8TDS4 363 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 CPEB1Q9BZB8 566 aaKnown RBP23.11■■□□□ 1.29
SMAD5-207ENST00000511116 CLSTN2Q9H4D0 955 aa23.11■■□□□ 1.29
SMAD5-207ENST00000511116 TSPAN11A1L157 253 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 UNGP13051 313 aaPredicted RBP23.1■■□□□ 1.29
SMAD5-207ENST00000511116 EEF1GP26641 437 aaKnown RBP23.1■■□□□ 1.29
SMAD5-207ENST00000511116 BLKP51451 505 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 JAM2P57087 298 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 PPARDQ03181 441 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 CLN3Q13286 438 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 AGERQ15109 404 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 KLHL40Q2TBA0 621 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 TCP11X2Q5H9J9 407 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 LRRC73Q5JTD7 316 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 ESRP1Q6NXG1 681 aaKnown RBP23.1■■□□□ 1.29
SMAD5-207ENST00000511116 ARL10Q8N8L6 244 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 CXorf40AQ8TE69 158 aa23.1■■□□□ 1.29
SMAD5-207ENST00000511116 FAM172AQ8WUF8 416 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms