RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 ANKZF1Q9H8Y5 726 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 DBNDD1Q9H9R9 158 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 IFT52Q9Y366 437 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PCDHB15Q9Y5E8 787 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PCDHGB1Q9Y5G3 927 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PCDHGA1Q9Y5H4 931 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PPP2R3BQ9Y5P8 575 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 LTBP3Q9NS15 1303 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 BORCS7-ASMTA0A0B4J1R7 106 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 ZSCAN5BA6NJL1 495 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 DISC1C4P0D8 188 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 NUAK1O60285 661 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 SNX3O60493 162 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PLIN3O60664 434 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 SLC19A2O60779 497 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 RDH16O75452 317 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 SERPINA6P08185 405 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 HIST1H2AGP0C0S8 130 aaPredicted RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 GSPT1P15170 499 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 HIST1H2ADP20671 130 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CFL1P23528 166 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 SULT1E1P49888 294 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 NDUFA8P51970 172 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PPP5CP53041 499 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 DRG2P55039 364 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 ACTR2P61160 394 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 TWF1Q12792 350 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 DPYDQ12882 1025 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 MYBPC3Q14896 1274 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 TRAM1Q15629 374 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 RBBP7Q16576 425 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 TTLL9Q3SXZ7 439 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 FAM160B1Q5W0V3 765 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 OLFML2AQ68BL7 652 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 ABLIM2Q6H8Q1 611 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CRTC3Q6UUV7 619 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 ASB18Q6ZVZ8 466 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 USP30Q70CQ3 517 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 USP51Q70EK9 711 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CHST3Q7LGC8 479 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 P2RY8Q86VZ1 359 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 JAMLQ86YT9 394 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 HPS6Q86YV9 775 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 DCP2Q8IU60 420 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 RIOX2Q8IUF8 465 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 SLC30A8Q8IWU4 369 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 TAB3Q8N5C8 712 aaPredicted RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CCNYL1Q8N7R7 359 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 KBTBD3Q8NAB2 608 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 ACBD4Q8NC06 268 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 BEST4Q8NFU0 473 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 TBCKQ8TEA7 893 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 BTN2A2Q8WVV5 523 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 SEC14L1Q92503 715 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 USP7Q93009 1102 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 HIST1H2AHQ96KK5 128 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PSKH2Q96QS6 385 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 TSNAXQ99598 290 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 HIST1H2AJQ99878 128 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 C7orf25Q9BPX7 421 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 RBM4BQ9BQ04 359 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 H2AFJQ9BTM1 129 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 RBM4Q9BWF3 364 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 PAPOLGQ9BWT3 736 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 REEP1Q9H902 201 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 ZCCHC17Q9NP64 241 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 KBTBD4Q9NVX7 518 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 GGA3Q9NZ52 723 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CXXC1Q9P0U4 656 aaPredicted RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 RCOR3Q9P2K3 495 aaPredicted RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 STXBP5LQ9Y2K9 1186 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PCDHGC5Q9Y5F6 944 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 ST14Q9Y5Y6 855 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 AP4B1Q9Y6B7 739 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 NCAPD2Q15021 1401 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 COL18A1P39060 1754 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 A0A1W2PRQ8 180 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 OR2AT4A6NND4 320 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 C6orf229H3BNL8 230 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 L7N2F9 121 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 M0QZK8 103 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 KIAA0355O15063 1070 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 GATCO43716 136 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 GGCTO75223 188 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 AP2A1O95782 977 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 UGT2B4P06133 528 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 NR2F2P24468 414 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 PAX6P26367 422 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CALCRP30988 508 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 LCN1P31025 176 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 CDKN2CP42773 168 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 SLC1A3P43003 542 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 GUCA1AP43080 201 aaPredicted RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 OMPP47874 163 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 AFF1P51825 1210 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 HK3P52790 923 aa3.6□□□□□ -1.83
USP53-205ENST00000509769 RPS6P62753 249 aaKnown RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 NKX6-1P78426 367 aaPredicted RBP3.6□□□□□ -1.83
USP53-205ENST00000509769 SLC7A5Q01650 507 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms