RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 NKIRAS2Q9NYR9 191 aa2.23□□□□□ -2.05
XRCC4-204ENST00000509268 KIF17Q9P2E2 1029 aa2.23□□□□□ -2.05
XRCC4-204ENST00000509268 AASSQ9UDR5 926 aa2.23□□□□□ -2.05
XRCC4-204ENST00000509268 GPR34Q9UPC5 381 aa2.23□□□□□ -2.05
XRCC4-204ENST00000509268 CEP83Q9Y592 693 aa2.23□□□□□ -2.05
XRCC4-204ENST00000509268 A0A087X0M5 115 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 TRBV5-7A0A0A0MS05 114 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 A0A0U1RQJ8 604 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 A0A1B0GX30 115 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 A0A1W2PPH5 198 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 KCNJ18B7U540 433 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 LDB2O43679 373 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 KIF1CO43896 1103 aaKnown RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 CRLF1O75462 422 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 MYZAPP0CAP1 466 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 PRG2P13727 222 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 CHRNA5P30532 468 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 CCR5P51681 352 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 SLC37A1P57057 533 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 RPS16P62249 146 aaKnown RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 MYBPHQ13203 477 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 CBFBQ13951 182 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 PTK2BQ14289 1009 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 TAF11Q15544 211 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 CDC37Q16543 378 aaPredicted RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 CCNG2Q16589 344 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 ZNF484Q5JVG2 852 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 TANGO2Q6ICL3 276 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 SULT6B1Q6IMI4 303 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 HEPHL1Q6MZM0 1159 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 HERC6Q8IVU3 1022 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 TXLNBQ8N3L3 684 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 DPP10Q8N608 796 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 FAM76AQ8TAV0 307 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 FAM71BQ8TC56 605 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 SPPL3Q8TCT6 385 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 SLC35F5Q8WV83 523 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 UCMAQ8WVF2 138 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 HVCN1Q96D96 273 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 MAELQ96JY0 434 aaKnown RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 TREX2Q9BQ50 279 aaPredicted RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 PYM1Q9BRP8 204 aaKnown RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 UBXN6Q9BZV1 441 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 HELLSQ9NRZ9 838 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 OLA1Q9NTK5 396 aaKnown RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 GIMAP2Q9UG22 337 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 SRP68Q9UHB9 627 aaKnown RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 FEM1BQ9UK73 627 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 SLC13A4Q9UKG4 626 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 MAN2B2Q9Y2E5 1009 aa2.22□□□□□ -2.05
XRCC4-204ENST00000509268 MAGED1Q9Y5V3 778 aaPredicted RBP2.22□□□□□ -2.05
XRCC4-204ENST00000509268 BICDL2A1A5D9 508 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 PGPEP1LA6NFU8 196 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 F5H0A9 414 aaPredicted RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 DOK2O60496 412 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 CCNT2O60583 730 aaKnown RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 USO1O60763 962 aaKnown RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 NDST3O95803 873 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 ITGA5P08648 1049 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 UBA7P41226 1012 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 STAT1P42224 750 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 GSTM5P46439 218 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 PNLIPRP1P54315 467 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 DRG2P55039 364 aaKnown RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 TLE2Q04725 743 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 RAB30Q15771 203 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 ZNF284Q2VY69 593 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 ZC2HC1BQ5TFG8 222 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 PALB2Q86YC2 1186 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 C2CD5Q86YS7 1000 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 FTSJ3Q8IY81 847 aaKnown RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 OR1N1Q8NGS0 311 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 ZMAT2Q96NC0 199 aaKnown RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 ZCCHC17Q9NP64 241 aaKnown RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 MRGBPQ9NV56 204 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 TMEM160Q9NX00 188 aa2.21□□□□□ -2.06
XRCC4-204ENST00000509268 NFKBIL1Q9UBC1 381 aaPredicted RBP2.21□□□□□ -2.06
XRCC4-204ENST00000509268 IGHV4OR15-8A0A075B7B6 117 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 A0A087WZ62 844 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 CLCA1A8K7I4 914 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 HNRNPDLO14979 420 aaKnown RBP2.2□□□□□ -2.06
XRCC4-204ENST00000509268 P4HA2O15460 535 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 FAM155BO75949 473 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 DNTTP04053 509 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 ALADP13716 330 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 AKR1B1P15121 316 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 XBP1P17861 261 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 CALRP27797 417 aaKnown RBP2.2□□□□□ -2.06
XRCC4-204ENST00000509268 GABRB3P28472 473 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 ALDH4A1P30038 563 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 PRKAA2P54646 552 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 PPIGQ13427 754 aaKnown RBP eCLIP2.2□□□□□ -2.06
XRCC4-204ENST00000509268 EFR3AQ14156 821 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 KRT32Q14532 448 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 ARHGAP15Q53QZ3 475 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 SLC10A5Q5PT55 438 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 SLC9C2Q5TAH2 1124 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 RRAGBQ5VZM2 374 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 ABLIM2Q6H8Q1 611 aa2.2□□□□□ -2.06
XRCC4-204ENST00000509268 TMEM71Q6P5X7 295 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms