RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 DEFB124Q8NES8 71 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 MDGA1Q8NFP4 955 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 RLN3Q8WXF3 142 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 TCEAL3Q969E4 200 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 HPS3Q969F9 1004 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 DNAJC19Q96DA6 116 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 CYFIP2Q96F07 1278 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 SIPA1Q96FS4 1042 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 TTC1Q99614 292 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 NUP58Q9BVL2 599 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 PDCL3Q9H2J4 239 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 PRDM16Q9HAZ2 1276 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 ACSS2Q9NR19 701 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 EVLQ9UI08 416 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 ASB1Q9Y576 335 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 SPO11Q9Y5K1 396 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 WDFY4Q6ZS81 3184 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 NCANO14594 1321 aa3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 ATXN2Q99700 1313 aaKnown RBP3.92□□□□□ -1.78
HMGN1P11-201ENST00000508668 CACNA1IQ9P0X4 2223 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZNF638Q14966 1978 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TRIP11Q15643 1979 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 A0A1B0GTW7 788 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 LNP1A1A4G5 178 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 FRMD3A2A2Y4 597 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ANKRD62A6NC57 917 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 K7EQS6 105 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SGK1O00141 431 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 CLDN5O00501 218 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 DDX3XO00571 662 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 PSMA7O14818 248 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 HOXC11O43248 304 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 MED7O43513 233 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 CYP7B1O75881 506 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 VNN2O95498 520 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 IL18BPO95998 194 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 APOEP02649 317 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 PROS1P07225 676 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SERPINF2P08697 491 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 CCDC130P13994 396 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZNF18P17022 549 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 DESP17661 470 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 POLR2EP19388 210 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ABCB4P21439 1286 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TBXAS1P24557 533 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 CD6P30203 668 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 HNF1BP35680 557 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 P2RY2P41231 377 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 PPP1R2P41236 205 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 MATKP42679 507 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 LSSP48449 732 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 MXI1P50539 228 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 BCAT1P54687 386 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 IRX4P78413 519 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 NFKB2Q00653 900 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SLC14A1Q13336 389 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 CDH18Q13634 790 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 EIF4HQ15056 248 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TRIP6Q15654 476 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TPD52L1Q16890 204 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 BMT2Q1RMZ1 405 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 EMC10Q5UCC4 262 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ESRP1Q6NXG1 681 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 RHBDF2Q6PJF5 856 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 DSG4Q86SJ6 1040 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TMEM150AQ86TG1 271 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 RASSF3Q86WH2 238 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 C1QL4Q86Z23 238 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 PASD1Q8IV76 773 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 UNC45BQ8IWX7 931 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 BBS7Q8IWZ6 715 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 C12orf56Q8IXR9 622 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 CARFQ8N187 725 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 GALNT15Q8N3T1 639 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 MINDY1Q8N5J2 469 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 LINC01356Q8N9X3 169 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TERB1Q8NA31 727 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 IL17RCQ8NAC3 791 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SCAMP5Q8TAC9 235 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 WDR48Q8TAF3 677 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 IPO4Q8TEX9 1081 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 KBTBD7Q8WVZ9 684 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ZCCHC14Q8WYQ9 949 aaKnown RBP3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 ERLEC1Q96DZ1 483 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 LRRC3BQ96PB8 259 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SLC22A12Q96S37 553 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 KCNK16Q96T55 309 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 OMDQ99983 421 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SPATA25Q9BR10 227 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 TTLL2Q9BWV7 592 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 B3GNT5Q9BYG0 378 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SLC2A11Q9BYW1 496 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 IKZF4Q9H2S9 585 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 DPEP3Q9H4B8 488 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SMYD3Q9H7B4 428 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 SYNCQ9H7C4 482 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 IFT22Q9H7X7 185 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 L2HGDHQ9H9P8 463 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 PNPLA8Q9NP80 782 aa3.91□□□□□ -1.78
HMGN1P11-201ENST00000508668 EMC7Q9NPA0 242 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms