RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SAAL1Q96ER3 474 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 MED15Q96RN5 788 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 GFM1Q96RP9 751 aaKnown RBP5.34□□□□□ -1.55
FXN-205ENST00000498653 CBWD1Q9BRT8 395 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 FAM213AQ9BRX8 229 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 CCDC94Q9BW85 323 aaPredicted RBP5.34□□□□□ -1.55
FXN-205ENST00000498653 RNF38Q9H0F5 515 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 FANCLQ9NW38 375 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 NCKIPSDQ9NZQ3 722 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 CNTN3Q9P232 1028 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 UXTQ9UBK9 157 aaPredicted RBP5.34□□□□□ -1.55
FXN-205ENST00000498653 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 FOXD3Q9UJU5 478 aaPredicted RBP5.34□□□□□ -1.55
FXN-205ENST00000498653 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
FXN-205ENST00000498653 PTPRJQ12913 1337 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 TLCD2A6NGC4 264 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 ABLIM1O14639 778 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 NPC1O15118 1278 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 MAPK13O15264 365 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 LATO43561 262 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 LRCH4O75427 683 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 EPHX1P07099 455 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 TPM2P07951 284 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 KRT19P08727 400 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 CLTAP09496 248 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 EGR1P18146 543 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 NFKBIAP25963 317 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 HOXC12P31275 282 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 MTIF2P46199 727 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 CASP4P49662 377 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 ACOT2P49753 483 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 OSTNP61366 133 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 POU5F1Q01860 360 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 OVGP1Q12889 678 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 SEMA5AQ13591 1074 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 C16orf72Q14CZ0 275 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 SURF1Q15526 300 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 SNRNP35Q16560 246 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 CPZQ66K79 652 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 OVOS1Q6IE37 1185 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 ALKAL1Q6UXT8 129 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 USP37Q86T82 979 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 BBS7Q8IWZ6 715 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 ZNF548Q8NEK5 533 aaPredicted RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 NAT6Q93015 286 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 OTUB2Q96DC9 234 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 EEF2KMTQ96G04 330 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 NT5C1BQ96P26 610 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 SLC25A23Q9BV35 468 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 BOCQ9BWV1 1114 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 HAPLN2Q9GZV7 340 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 ZCWPW1Q9H0M4 648 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 METTL14Q9HCE5 456 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 MRPL40Q9NQ50 206 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 SAMSN1Q9NSI8 373 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 KLHL11Q9NVR0 708 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 RBAKQ9NYW8 714 aaPredicted RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 TBC1D14Q9P2M4 693 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 ARMCX3Q9UH62 379 aaPredicted RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 SALL4Q9UJQ4 1053 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 NAGPAQ9UK23 515 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 POLHQ9Y253 713 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 CA5BQ9Y2D0 317 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 PCDHB5Q9Y5E4 795 aa5.33□□□□□ -1.56
FXN-205ENST00000498653 MDC1Q14676 2089 aaKnown RBP5.33□□□□□ -1.56
FXN-205ENST00000498653 GOLGA6L3A6NEY3 463 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 NEDD8-MDP1E9PL57 170 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 EIF1AYO14602 144 aaKnown RBP5.32□□□□□ -1.56
FXN-205ENST00000498653 EREGO14944 169 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 PROM1O43490 865 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 STX10O60499 249 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 DPM1O60762 260 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 IL18RAPO95256 599 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 SERPINC1P01008 464 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 ADRB2P07550 413 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 TYRP14679 529 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 ZNF18P17022 549 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 F8A1P23610 371 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 EEF1GP26641 437 aaKnown RBP5.32□□□□□ -1.56
FXN-205ENST00000498653 RPL9P32969 192 aaKnown RBP5.32□□□□□ -1.56
FXN-205ENST00000498653 VAMP7P51809 220 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 CDH8P55286 799 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 CCL7P80098 99 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 ZBTB16Q05516 673 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 PPP2R3AQ06190 1150 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 ENPEPQ07075 957 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 CYP24A1Q07973 514 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 KCNMA1Q12791 1236 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 PSMD6Q15008 389 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 DEFB133Q30KQ1 61 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 FILIP1LQ4L180 1135 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 HSP90AA4PQ58FG1 418 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 TCP11X2Q5H9J9 407 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 CDKAL1Q5VV42 579 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 TCERG1LQ5VWI1 586 aa5.32□□□□□ -1.56
FXN-205ENST00000498653 CRELD2Q6UXH1 353 aaPredicted RBP5.32□□□□□ -1.56
FXN-205ENST00000498653 C20orf204Q6ZNR8 217 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms