RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MMP20O60882 483 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 CSO75390 466 aaKnown RBP18.78■□□□□ 0.6
PRKCB-209ENST00000498058 GCATO75600 419 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 C1QL1O75973 258 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 GP1BAP07359 652 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 TIMP2P16035 220 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 RPL7AP62424 266 aaKnown RBP18.78■□□□□ 0.6
PRKCB-209ENST00000498058 UBXN1Q04323 297 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 TLE3Q04726 772 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 C1orf61Q13536 156 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 GSE1Q14687 1217 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 CDKN3Q16667 212 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 GDPD4Q6W3E5 623 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 NYAP1Q6ZVC0 841 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 MON1BQ7L1V2 547 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 VPS36Q86VN1 386 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 SPACA3Q8IXA5 215 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 RTL3Q8N8U3 475 aaKnown RBP18.78■□□□□ 0.6
PRKCB-209ENST00000498058 C3orf20Q8ND61 904 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 DENND6BQ8NEG7 585 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 LMX1AQ8TE12 382 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 HMCESQ96FZ2 354 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 UBL7Q96S82 380 aaPredicted RBP18.78■□□□□ 0.6
PRKCB-209ENST00000498058 SELENOOQ9BVL4 669 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 RTN4Q9NQC3 1192 aaKnown RBP18.78■□□□□ 0.6
PRKCB-209ENST00000498058 IPO11Q9UI26 975 aaKnown RBP18.78■□□□□ 0.6
PRKCB-209ENST00000498058 CSNK1G3Q9Y6M4 447 aa18.78■□□□□ 0.6
PRKCB-209ENST00000498058 SIGLEC16A6NMB1 481 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 NEMP1O14524 444 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 RRP8O43159 456 aaKnown RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 USP12O75317 370 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 ACTN2P35609 894 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 NSFP46459 744 aaKnown RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 GEMIN4P57678 1058 aaKnown RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 OGDHQ02218 1023 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 CYTH1Q15438 398 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 PERM1Q5SV97 790 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 ZCCHC8Q6NZY4 707 aaKnown RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 CRTC1Q6UUV9 634 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 APTXQ7Z2E3 356 aaKnown RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 SLFN11Q7Z7L1 901 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 TTC7BQ86TV6 843 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 NAF1Q96HR8 494 aaKnown RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 HIC2Q96JB3 615 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 FCRL3Q96P31 734 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-209ENST00000498058 DUSP23Q9BVJ7 150 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 TRIM5Q9C035 493 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 TTYH3Q9C0H2 523 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 IFNKQ9P0W0 207 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 LHX3Q9UBR4 397 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 FZD10Q9ULW2 581 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 HPCAL4Q9UM19 191 aa18.77■□□□□ 0.6
PRKCB-209ENST00000498058 GCN1Q92616 2671 aaKnown RBP18.77■□□□□ 0.59
PRKCB-209ENST00000498058 CPED1A4D0V7 1026 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 PMS2P1A4D2B8 440 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 RASA4BC9J798 803 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 RASA4O43374 803 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 LZTS3O60299 673 aaPredicted RBP18.76■□□□□ 0.59
PRKCB-209ENST00000498058 CELA2BP08218 269 aaPredicted RBP18.76■□□□□ 0.59
PRKCB-209ENST00000498058 EPHB2P29323 1055 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 GABREP78334 506 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 PPP1R15BQ5SWA1 713 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 SCYL2Q6P3W7 929 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 PCSK4Q6UW60 755 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 EFL1Q7Z2Z2 1120 aaKnown RBP18.76■□□□□ 0.59
PRKCB-209ENST00000498058 ZSCAN30Q86W11 494 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 MAPK15Q8TD08 544 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 EXOC2Q96KP1 924 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 DEPDC7Q96QD5 511 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 OSBPL1AQ9BXW6 950 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 CLPBQ9H078 707 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 GRPEL1Q9HAV7 217 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 USP29Q9HBJ7 922 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 COQ6Q9Y2Z9 468 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 MFHAS1Q9Y4C4 1052 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 LRP4O75096 1905 aa18.76■□□□□ 0.59
PRKCB-209ENST00000498058 EME2A4GXA9 379 aaPredicted RBP18.75■□□□□ 0.59
PRKCB-209ENST00000498058 H3BM21 787 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 PIGNO95427 931 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 DUSP3P51452 185 aaPredicted RBP18.75■□□□□ 0.59
PRKCB-209ENST00000498058 ZNF143P52747 638 aaPredicted RBP18.75■□□□□ 0.59
PRKCB-209ENST00000498058 SERINC3Q13530 473 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 ISXQ2M1V0 245 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 ZNF354CQ86Y25 554 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 SLC35F3Q8IY50 421 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 PHACTR4Q8IZ21 702 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 SLC39A7Q92504 469 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 PCMTD1Q96MG8 357 aaPredicted RBP18.75■□□□□ 0.59
PRKCB-209ENST00000498058 GDAP1L1Q96MZ0 367 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 MCEEQ96PE7 176 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 AGPAT1Q99943 283 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 WRAP53Q9BUR4 548 aaKnown RBP18.75■□□□□ 0.59
PRKCB-209ENST00000498058 LRRC61Q9BV99 259 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 BOCQ9BWV1 1114 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 ASCL3Q9NQ33 180 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 SALL4Q9UJQ4 1053 aa18.75■□□□□ 0.59
PRKCB-209ENST00000498058 ANKRD36A6QL64 1941 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 A0A1W2PQC6 194 aa18.74■□□□□ 0.59
PRKCB-209ENST00000498058 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms