RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 FRA10AC1Q70Z53 315 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 SH3BP5LQ7L8J4 393 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 LGI2Q8N0V4 545 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 SEPT8Q92599 483 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 NXNL1Q96CM4 212 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 MASTLQ96GX5 879 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ZNF341Q9BYN7 854 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 EVLQ9UI08 416 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 TSR3Q9UJK0 312 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 MID2Q9UJV3 735 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 CARD8Q9Y2G2 431 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ZNFX1Q9P2E3 1918 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ANKRD34BA5PLL1 514 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 SNAP91O60641 907 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 CCNKO75909 580 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 LDLRP01130 860 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ITGB3P05106 788 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 GOT1P17174 413 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 GABRB3P28472 473 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ADORA2BP29275 332 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 OXTRP30559 389 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 TTKP33981 857 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 RPS9P46781 194 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 JAK3P52333 1124 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 MAPRE2Q15555 327 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 LIPMQ5VYY2 423 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 SLFN12LQ6IEE8 588 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 TAS1R3Q7RTX0 852 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 KCNMB4Q86W47 210 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ALPK1Q96QP1 1244 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 PRRG3Q9BZD7 231 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 TRIM15Q9C019 465 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 PRDM8Q9NQV8 689 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 TBC1D13Q9NVG8 400 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 CACNA2D2Q9NY47 1150 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 SMPD3Q9NY59 655 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 AASSQ9UDR5 926 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 PCDHGA7Q9Y5G6 932 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
TRAPPC12-223ENST00000497597 DLEC1Q9Y238 1755 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 PCM1Q15154 2024 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 GRID2O43424 1007 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 NOBOXO60393 691 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 PTGER2P43116 358 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 CLK1P49759 484 aaKnown RBP10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 VBP1P61758 197 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 SNRPFP62306 86 aaKnown RBP10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 BAATQ14032 418 aaPredicted RBP10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 INAVAQ3KP66 663 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 NHSL2Q5HYW2 709 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 FSTL5Q8N475 847 aaPredicted RBP10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 FIG4Q92562 907 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 FBXL18Q96ME1 805 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 TMPRSS4Q9NRS4 437 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 U3KQV3 271 aa10.71□□□□□ -0.7
TRAPPC12-223ENST00000497597 ANKRD36CQ5JPF3 1778 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 DHX15O43143 795 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 POLR2IP36954 125 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 POU6F1Q14863 301 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 BOLA3Q53S33 107 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ATAD3BQ5T9A4 648 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 RNF149Q8NC42 400 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ZNF280CQ8ND82 737 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 APBB2Q92870 758 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 SLCO4A1Q96BD0 722 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TSPAN18Q96SJ8 248 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 HAPLN2Q9GZV7 340 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TRPV5Q9NQA5 729 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 COQ3Q9NZJ6 369 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 VANGL2Q9ULK5 521 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 RPS6KA4O75676 772 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CAPGP40121 348 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 IST1P53990 364 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CCNA1P78396 465 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CDK18Q07002 472 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TRIM32Q13049 653 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 MEP1AQ16819 746 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ARHGAP17Q68EM7 881 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ERMP1Q7Z2K6 904 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TP53INP2Q8IXH6 220 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CMTR2Q8IYT2 770 aaKnown RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TUBGCP3Q96CW5 907 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 FCRL3Q96P31 734 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 DEPDC7Q96QD5 511 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CPNE1Q99829 537 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ANKEF1Q9NU02 776 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ACOT9Q9Y305 439 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TRAF6Q9Y4K3 522 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 PTGDR2Q9Y5Y4 395 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 CSADQ9Y600 493 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 PMF1-BGLAPU3KQ54 211 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 ARFGEF1Q9Y6D6 1849 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 LAMB2P55268 1798 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 UBR2Q8IWV8 1755 aa10.7□□□□□ -0.7
TRAPPC12-223ENST00000497597 TRPC5OSA6NMA1 111 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms