RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SPTY2D1-AS1A0A0U1RR47 76 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 NEMP1O14524 444 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 FFAR2O15552 330 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 PRAMEF11O60813 436 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 LRCH4O75427 683 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 PIGNO95427 931 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 DESP17661 470 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 MIPP30301 263 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 PBX1P40424 430 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 RABIFP47224 123 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 PFN3P60673 137 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 ZNF211Q13398 564 aaPredicted RBP14.45□□□□□ -0.1
VTI1A-209ENST00000496445 FIGNQ5HY92 759 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 ERMARDQ5T6L9 678 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 AFMIDQ63HM1 303 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 RFX8Q6ZV50 586 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 PARGQ86W56 976 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 NPWQ8N729 165 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 ASB12Q8WXK4 309 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 IFT43Q96FT9 208 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 CPEB1Q9BZB8 566 aaKnown RBP14.45□□□□□ -0.1
VTI1A-209ENST00000496445 EDEM3Q9BZQ6 932 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 SLC39A8Q9C0K1 460 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 DNAJC28Q9NX36 388 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 DKK3Q9UBP4 350 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 RAXQ9Y2V3 346 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 GPSM3Q9Y4H4 160 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 U3KQA8 63 aa14.45□□□□□ -0.1
VTI1A-209ENST00000496445 TSPAN11A1L157 253 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 EIF3CLB5ME19 914 aaKnown RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 FPGTO14772 594 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 MMP20O60882 483 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 SERPINC1P01008 464 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 CSF2P04141 144 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 CDK4P11802 303 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 NME1P15531 152 aaKnown RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 TCF4P15884 667 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 TIMP2P16035 220 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 HNF1BP35680 557 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 IGFALSP35858 605 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 RGRP47804 291 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 PAPOLAP51003 745 aaKnown RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 NDST2P52849 883 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 CYP4F3Q08477 520 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 SGCGQ13326 291 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 ILKQ13418 452 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 PDE1CQ14123 709 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 KLHL40Q2TBA0 621 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 TTC7BQ86TV6 843 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 LUZP1Q86V48 1076 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 ZSWIM9Q86XI8 627 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 DCP2Q8IU60 420 aaKnown RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 PDCD7Q8N8D1 485 aaKnown RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 ZNF548Q8NEK5 533 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 RFFLQ8WZ73 363 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 CENPTQ96BT3 561 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 ARHGEF26Q96DR7 871 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 EIF3CQ99613 913 aaKnown RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 ISCUQ9H1K1 167 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 PNMA8BQ9ULN7 279 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-209ENST00000496445 SCINQ9Y6U3 715 aa14.44□□□□□ -0.1
VTI1A-209ENST00000496445 KNTC1P50748 2209 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 A0A1W2PQJ5 194 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 PRPSAP2O60256 369 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 BUB1BO60566 1050 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 NEBLO76041 1014 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 MYF5P13349 255 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 ERCC2P18074 760 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 IL1R2P27930 398 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 FANCCQ00597 558 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 INSM1Q01101 510 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 RAD51Q06609 339 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 EIF2B5Q13144 721 aaKnown RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 TARDBPQ13148 414 aaKnown RBP eCLIP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 DPYSQ14117 519 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 PPP6R3Q5H9R7 873 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 VPS36Q86VN1 386 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 TP53INP2Q8IXH6 220 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 TP53I13Q8NBR0 393 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 CXorf40AQ8TE69 158 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 NCAPGQ9BPX3 1015 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 WRAP53Q9BUR4 548 aaKnown RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 MBNL1Q9NR56 388 aaKnown RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 NLGN3Q9NZ94 848 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 CWC15Q9P013 229 aaKnown RBP14.43□□□□□ -0.1
VTI1A-209ENST00000496445 MYO1AQ9UBC5 1043 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 SHROOM3Q8TF72 1996 aa14.43□□□□□ -0.1
VTI1A-209ENST00000496445 ARHGAP42A6NI28 874 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 SCAMP1O15126 338 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 RNF8O76064 485 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 MYBL1P10243 752 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 CKMT1AP12532 417 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 JUPP14923 745 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 HNRNPKP61978 463 aaKnown RBP eCLIP14.42□□□□□ -0.1
VTI1A-209ENST00000496445 DAB2P98082 770 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 IRF4Q15306 451 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 TMEM52BQ4KMG9 183 aa14.42□□□□□ -0.1
VTI1A-209ENST00000496445 PSTKQ8IV42 348 aaKnown RBP14.42□□□□□ -0.1
VTI1A-209ENST00000496445 RBFAQ8N0V3 343 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms