RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CCDC42Q96M95 316 aa14.61□□□□□ -0.07
CXCL12-208ENST00000496375 MAGEB5Q9BZ81 275 aa14.61□□□□□ -0.07
CXCL12-208ENST00000496375 DEF6Q9H4E7 631 aa14.61□□□□□ -0.07
CXCL12-208ENST00000496375 NEU3Q9UQ49 428 aa14.61□□□□□ -0.07
CXCL12-208ENST00000496375 CLCA2Q9UQC9 943 aa14.61□□□□□ -0.07
CXCL12-208ENST00000496375 HS3ST3A1Q9Y663 406 aa14.61□□□□□ -0.07
CXCL12-208ENST00000496375 FASNP49327 2511 aaKnown RBP14.6□□□□□ -0.07
CXCL12-208ENST00000496375 CXorf51AA0A1B0GTR3 108 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 GOLGA6L3A6NEY3 463 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 POM121BA6NF01 834 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 RAD51BO15315 384 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 AP1G1O43747 822 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 AKR1B10O60218 316 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 LRIG2O94898 1065 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 TMEM253P0C7T8 217 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 ALPPL2P10696 532 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 ABCG1P45844 678 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 E2F1Q01094 437 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 TCEAL1Q15170 157 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 KYAT3Q6YP21 454 aaKnown RBP14.6□□□□□ -0.07
CXCL12-208ENST00000496375 LEKR1Q6ZMV7 388 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 DCP2Q8IU60 420 aaKnown RBP14.6□□□□□ -0.07
CXCL12-208ENST00000496375 PLPP6Q8IY26 295 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 CACTIN-AS1Q8N1I8 211 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 CCDC185Q8N715 623 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 NIPA2Q8N8Q9 360 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 DCBLD1Q8N8Z6 715 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 FAM174AQ8TBP5 190 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 IFT43Q96FT9 208 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 NCAPGQ9BPX3 1015 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 RETREG1Q9H6L5 497 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 GPR27Q9NS67 375 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 TMEM248Q9NWD8 314 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 DNAJC28Q9NX36 388 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 INTUQ9ULD6 942 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 HPCAL4Q9UM19 191 aa14.6□□□□□ -0.07
CXCL12-208ENST00000496375 C16orf96A6NNT2 1141 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 RAMP2O60895 175 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 MT-CO3P00414 261 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 H2AFZP0C0S5 128 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 CKMT1AP12532 417 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 EIF2S3P41091 472 aaKnown RBP14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ABL2P42684 1182 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 GEMIN4P57678 1058 aaKnown RBP14.59□□□□□ -0.07
CXCL12-208ENST00000496375 POLD3Q15054 466 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ZNF805Q5CZA5 627 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 KDM7AQ6ZMT4 941 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 H2AFVQ71UI9 128 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ZSCAN30Q86W11 494 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ARFGAP1Q8N6T3 406 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 OR2AP1Q8NGE2 309 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ARHGEF26Q96DR7 871 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 TRIM7Q9C029 511 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 MAGEH1Q9H213 219 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 NLGN3Q9NZ94 848 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 UVRAGQ9P2Y5 699 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ITM2BQ9Y287 266 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 ASXL3Q9C0F0 2248 aa14.59□□□□□ -0.07
CXCL12-208ENST00000496375 SPTY2D1-AS1A0A0U1RR47 76 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 NEMP2A6NFY4 417 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 IGLON5A6NGN9 336 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 EIF3CLB5ME19 914 aaKnown RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 KRIT1O00522 736 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 NEMP1O14524 444 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 FPGTO14772 594 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 SCAMP1O15126 338 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 TSPAN6O43657 245 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 BRINP1O60477 761 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 NEBLO76041 1014 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 MTA2O94776 668 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 GSRP00390 522 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 CSF2P04141 144 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 UGT2B4P06133 528 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 MYF5P13349 255 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 DESP17661 470 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 ITPKBP27987 946 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 PCK1P35558 622 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 RABIFP47224 123 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 HNRNPKP61978 463 aaKnown RBP eCLIP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 SNRPD1P62314 119 aaKnown RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 SGCGQ13326 291 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 FZD2Q14332 565 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 LRRC69Q6ZNQ3 347 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 CYP4V2Q6ZWL3 525 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 PARGQ86W56 976 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 ZNF354CQ86Y25 554 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 TMTC1Q8IUR5 882 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 TMEM139Q8IV31 216 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 CTNNBL1Q8WYA6 563 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 RAB7BQ96AH8 199 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 APOLD1Q96LR9 279 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 BBC3Q96PG8 261 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 LENG8Q96PV6 779 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 KLF6Q99612 283 aaPredicted RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 EIF3CQ99613 913 aaKnown RBP14.58□□□□□ -0.08
CXCL12-208ENST00000496375 C1QTNF2Q9BXJ5 285 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 PACSIN1Q9BY11 444 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 SPTLC3Q9NUV7 552 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 MYO1AQ9UBC5 1043 aa14.58□□□□□ -0.08
CXCL12-208ENST00000496375 IPO11Q9UI26 975 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms