RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 GPR158Q5T848 1215 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 ZC3HC1Q86WB0 502 aaKnown RBP13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 ARMC2Q8NEN0 867 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 DDI1Q8WTU0 396 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 IFT43Q96FT9 208 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 MTIF3Q9H2K0 278 aaKnown RBP13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 CAB39LQ9H9S4 337 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 PLK2Q9NYY3 685 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 VPS28Q9UK41 221 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 EMCNQ9ULC0 261 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 ZNF510Q9Y2H8 683 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 KCTD3Q9Y597 815 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 PER2O15055 1255 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 TMCC1O94876 653 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 GSRP00390 522 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 RB1P06400 928 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 RHOP08100 348 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 PTPN2P17706 415 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 HLA-DPA1P20036 260 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 TYK2P29597 1187 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 MPP1Q00013 466 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 IFT88Q13099 833 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 CDH18Q13634 790 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 DLG2Q15700 870 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 SLC14A2Q15849 920 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 TPGS1Q6ZTW0 290 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 RTL10Q7L3V2 364 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 APCDD1Q8J025 514 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 SH3RF2Q8TEC5 729 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 VPS39Q96JC1 886 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 CABS1Q96KC9 395 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 MECRQ9BV79 373 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 VPS51Q9UID3 782 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 PHTF1Q9UMS5 762 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 TYW5A2RUC4 315 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 EDF1O60869 148 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 PAPSS2O95340 614 aaPredicted RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 MT-CO1P00395 513 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 PRLP01236 227 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 FGF1P05230 155 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 PAMP19021 973 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 SLC1A2P43004 574 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CSRP3P50461 194 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 ARSDP51689 593 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 NTHL1P78549 312 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 MPP7Q5T2T1 576 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 RNF43Q68DV7 783 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 C16orf46Q6P387 395 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 SPATA21Q7Z572 469 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 SPATS2Q86XZ4 545 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 MFN1Q8IWA4 741 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 MFSD6LQ8IWD5 586 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CMTM8Q8IZV2 173 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 NSMCE4AQ9NXX6 385 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CHKBQ9Y259 395 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 USP15Q9Y4E8 981 aaPredicted RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 E2F8A0AVK6 867 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 ANKRD65E5RJM6 399 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CCL22O00626 93 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 TIMM44O43615 452 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 NDST3O95803 873 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 BGNP21810 368 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 HOXA9P31269 272 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 SERPINB8P50452 374 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 ITIH4Q14624 930 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 GRM3Q14832 879 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CES4AQ5XG92 561 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CNPY4Q8N129 248 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 C2CD4AQ8NCU7 369 aaPredicted RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 USP13Q92995 863 aaPredicted RBP13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 NUDCD1Q96RS6 583 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 GPR22Q99680 433 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 RHOJQ9H4E5 214 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 HAUS2Q9NVX0 235 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 LHX3Q9UBR4 397 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 STARD13Q9Y3M8 1113 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 ARL5AQ9Y689 179 aa13.79□□□□□ -0.2
SPTBN1-205ENST00000496323 CHD5Q8TDI0 1954 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 RANBP2P49792 3224 aaKnown RBP13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 K7ERQ8 282 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 PDHA1P08559 390 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 PIRTP0C851 137 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 PGGT1BP53609 377 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 MPPE1Q53F39 396 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 INO80DQ53TQ3 878 aaPredicted RBP13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 N4BP2L1Q5TBK1 243 aaPredicted RBP13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 ZNF697Q5TEC3 545 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 FYB2Q5VWT5 728 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 ZNF470Q6ECI4 717 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 NEPROQ6NW34 567 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 KYAT3Q6YP21 454 aaKnown RBP13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 OTOAQ7RTW8 1153 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 DCAF4L2Q8NA75 395 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 TDRD1Q9BXT4 1180 aaKnown RBP13.78□□□□□ -0.2
SPTBN1-205ENST00000496323 TASP1Q9H6P5 420 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms