RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 NAPEPLDQ6IQ20 393 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 ANO7Q6IWH7 933 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 TMEM92Q6UXU6 159 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 SRLQ86TD4 932 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 LONP2Q86WA8 852 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 PGBD3Q8N328 593 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.6□□□□□ -0.87
ACTN4-207ENST00000495553 OR8D1Q8WZ84 308 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 IMP4Q96G21 291 aaKnown RBP9.6□□□□□ -0.87
ACTN4-207ENST00000495553 LRIG1Q96JA1 1093 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 GABRG3Q99928 467 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 SEMA3CQ99985 751 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 OSBPL1AQ9BXW6 950 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 FBRSQ9HAH7 460 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 ETNK1Q9HBU6 452 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 ARGLU1Q9NWB6 273 aaPredicted RBP9.6□□□□□ -0.87
ACTN4-207ENST00000495553 HECAQ9UBI9 543 aaPredicted RBP9.6□□□□□ -0.87
ACTN4-207ENST00000495553 HCN2Q9UL51 889 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 SHOC2Q9UQ13 582 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
ACTN4-207ENST00000495553 SNX24Q9Y343 169 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 NEU2Q9Y3R4 380 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 PCDHGA2Q9Y5H1 932 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 SHROOM3Q8TF72 1996 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 MUC6Q6W4X9 2439 aa9.6□□□□□ -0.87
ACTN4-207ENST00000495553 NYNRINQ9P2P1 1898 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 VPS13AQ96RL7 3174 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CACNA1HO95180 2353 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CHD5Q8TDI0 1954 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 AXIN1O15169 862 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 ALOX15BO15296 676 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 SOCS5O75159 536 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 SEC31AO94979 1220 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 AP2A1O95782 977 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 MT-CO1P00395 513 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 PRNPP04156 253 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 EPHX1P07099 455 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 TDGF1P13385 188 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 TPSB2P20231 275 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CD86P42081 329 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 RPL21P46778 160 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 EPHB1P54762 984 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 MAXP61244 160 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 POLR2LP62875 67 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 MRPS25P82663 173 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 DSC2Q02487 901 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 BCL2L1Q07817 233 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CCDC15Q0P6D6 951 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 SFSWAPQ12872 951 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 LAMB3Q13751 1172 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 TPSAB1Q15661 275 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 ERCC6LQ2NKX8 1250 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 MYLK3Q32MK0 819 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 ALG1LQ6GMV1 187 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 PDIK1LQ8N165 341 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 TAB3Q8N5C8 712 aaPredicted RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CNTD1Q8N815 330 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 DNAAF3Q8N9W5 541 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 HMGB4Q8WW32 186 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 ERLEC1Q96DZ1 483 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 PPP1R16AQ96I34 528 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 ZNF641Q96N77 438 aaPredicted RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 SRPK1Q96SB4 655 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 RBM15Q96T37 977 aaKnown RBP eCLIP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 TM6SF2Q9BZW4 377 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 TNKS2Q9H2K2 1166 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 NOD2Q9HC29 1040 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 XAB2Q9HCS7 855 aaKnown RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 DYRK4Q9NR20 520 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 FAM86C1Q9NVL1 165 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 EBF1Q9UH73 591 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 R4GN57 208 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
ACTN4-207ENST00000495553 ZNF318Q5VUA4 2279 aa9.59□□□□□ -0.87
ACTN4-207ENST00000495553 CCDC163A0A0D9SF12 145 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 A0A1W2PQF6 199 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 TTC34A8MYJ7 566 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 C1QTNF3-AMACRE9PGA6 284 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 K7ERQ8 282 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
ACTN4-207ENST00000495553 PMPCBO75439 489 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 METTL18O95568 372 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 EPOP01588 193 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 HLA-EP13747 358 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 XPAP23025 273 aaPredicted RBP9.58□□□□□ -0.88
ACTN4-207ENST00000495553 PRKCHP24723 683 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 TNFRSF8P28908 595 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 CD68P34810 354 aaPredicted RBP9.58□□□□□ -0.88
ACTN4-207ENST00000495553 CNR2P34972 360 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 CCNHP51946 323 aaPredicted RBP9.58□□□□□ -0.88
ACTN4-207ENST00000495553 ITGA8P53708 1063 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 TERF1P54274 439 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 PLTPP55058 493 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 ARL4CP56559 192 aa9.58□□□□□ -0.88
ACTN4-207ENST00000495553 RPL26P61254 145 aaKnown RBP9.58□□□□□ -0.88
ACTN4-207ENST00000495553 DMWDQ09019 674 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms