RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 FAM43BQ6ZT52 329 aaPredicted RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 LSMEM2Q8N112 164 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 SHKBP1Q8TBC3 707 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 MICAL1Q8TDZ2 1067 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 JADE3Q92613 823 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 FAM136AQ96C01 138 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 TTC1Q99614 292 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 ZNF184Q99676 751 aaPredicted RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 WDR55Q9H6Y2 383 aaPredicted RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 SP110Q9HB58 689 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 ZDHHC2Q9UIJ5 367 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 SSX2IPQ9Y2D8 614 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 J3KR12 359 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 SLC22A2O15244 555 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 NPHS1O60500 1241 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 PDE5AO76074 875 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 PDHA1P08559 390 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 THRAP10827 490 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CD86P42081 329 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 TBL3Q12788 808 aaKnown RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 PEX6Q13608 980 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 VARS2Q5ST30 1063 aaKnown RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 TSTD2Q5T7W7 516 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 IRGCQ6NXR0 463 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 ADGRG6Q86SQ4 1221 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 HEXDCQ8WVB3 486 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 LINC01599Q8WXQ3 324 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 LENG8Q96PV6 779 aaPredicted RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 FAM193BQ96PV7 902 aaPredicted RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 CCDC28BQ9BUN5 200 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 S100A14Q9HCY8 104 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 PPM1HQ9ULR3 514 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CORO1CQ9ULV4 474 aaPredicted RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 CDYLQ9Y232 598 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 IGLV3-10A0A075B6K4 115 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 SYN3O14994 580 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 TADA2AO75478 443 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 ZMPSTE24O75844 475 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CNTN5O94779 1100 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 SNUPNO95149 360 aaKnown RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 PAPSS2O95340 614 aaPredicted RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 BAG2O95816 211 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 PIK3R1P27986 724 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 EPHA3P29320 983 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 SERPINB5P36952 375 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CLCN5P51795 746 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 FAM189BP81408 668 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 SLC10A7Q0GE19 358 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 PSMD5Q16401 504 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 ALFQ53S48 1182 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CNSTQ6PJW8 725 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 FBXW8Q8N3Y1 598 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 SPATA6LQ8N4H0 392 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CCNYL1Q8N7R7 359 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 PABPC5Q96DU9 382 aaKnown RBP15.48■□□□□ 0.07
CALD1-222ENST00000495522 BTN2A3PQ96KV6 586 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 OMDQ99983 421 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 NUF2Q9BZD4 464 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 CLIC5Q9NZA1 410 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 IL37Q9NZH6 218 aa15.48■□□□□ 0.07
CALD1-222ENST00000495522 MIA3Q5JRA6 1907 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 DOCK4Q8N1I0 1966 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 ELNP15502 786 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 ATP5F1P24539 256 aaPredicted RBP15.47■□□□□ 0.07
CALD1-222ENST00000495522 LEPRP48357 1165 aaKnown RBP15.47■□□□□ 0.07
CALD1-222ENST00000495522 ACLYP53396 1101 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 DNAJB13P59910 316 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 MAXP61244 160 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 TRIP4Q15650 581 aaPredicted RBP15.47■□□□□ 0.07
CALD1-222ENST00000495522 CTXN3Q4LDR2 81 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 PIWIL4Q7Z3Z4 852 aaKnown RBP15.47■□□□□ 0.07
CALD1-222ENST00000495522 RNF180Q86T96 592 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 CPSF7Q8N684 471 aaKnown RBP15.47■□□□□ 0.07
CALD1-222ENST00000495522 TEX26Q8N6G2 289 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 FBXO32Q969P5 355 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 PPP1R36Q96LQ0 422 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 KLHL5Q96PQ7 755 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 ZIC5Q96T25 663 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 OLA1Q9NTK5 396 aaKnown RBP15.47■□□□□ 0.07
CALD1-222ENST00000495522 NCKIPSDQ9NZQ3 722 aa15.47■□□□□ 0.07
CALD1-222ENST00000495522 RGSL1A5PLK6 1076 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 AURKAO14965 403 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 MMP2P08253 660 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 YWHAQP27348 245 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 ADSLP30566 484 aaPredicted RBP15.46■□□□□ 0.07
CALD1-222ENST00000495522 PPARGP37231 505 aaPredicted RBP15.46■□□□□ 0.07
CALD1-222ENST00000495522 DSC2Q02487 901 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 TNK2Q07912 1038 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 NSUN2Q08J23 767 aaKnown RBP eCLIP15.46■□□□□ 0.07
CALD1-222ENST00000495522 CCNIQ14094 377 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 MBTPS1Q14703 1052 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 FAM83EQ2M2I3 478 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 RBM20Q5T481 1227 aaKnown RBP15.46■□□□□ 0.07
CALD1-222ENST00000495522 TRAF7Q6Q0C0 670 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 SETD3Q86TU7 594 aaPredicted RBP15.46■□□□□ 0.07
CALD1-222ENST00000495522 ZNF354CQ86Y25 554 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 KBTBD2Q8IY47 623 aa15.46■□□□□ 0.07
CALD1-222ENST00000495522 TXNDC5Q8NBS9 432 aaKnown RBP15.46■□□□□ 0.07
CALD1-222ENST00000495522 PSMG2Q969U7 264 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 321.2 ms