RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 DCUN1D2Q6PH85 259 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 GDPD4Q6W3E5 623 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 PDZD3Q86UT5 571 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 VPS36Q86VN1 386 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 PARGQ86W56 976 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 ARHGAP12Q8IWW6 846 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 TP53INP2Q8IXH6 220 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 UMODL1-AS1Q8N2C9 162 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 DCBLD1Q8N8Z6 715 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 CENPTQ96BT3 561 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 NXPE2Q96DL1 559 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 LRIG1Q96JA1 1093 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 FEM1CQ96JP0 617 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 BBC3Q96PG8 261 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-208ENST00000494728 EPAS1Q99814 870 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 FUCA2Q9BTY2 467 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
VTI1A-208ENST00000494728 HAUS4Q9H6D7 363 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 RETREG1Q9H6L5 497 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 MBNL1Q9NR56 388 aaKnown RBP11.79□□□□□ -0.52
VTI1A-208ENST00000494728 HPCAL4Q9UM19 191 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 AP4E1Q9UPM8 1137 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 COQ6Q9Y2Z9 468 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 ZNF462Q96JM2 2506 aa11.79□□□□□ -0.52
VTI1A-208ENST00000494728 AHCTF1Q8WYP5 2266 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 A0A087WV48 116 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 A0A1B0GTH6 734 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 TSPAN11A1L157 253 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 ZSCAN5CA6NGD5 496 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 K7ESM1 405 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 DDX3XO00571 662 aaKnown RBP eCLIP11.78□□□□□ -0.522e-9■■□□□ 14.2
VTI1A-208ENST00000494728 BUB1BO60566 1050 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 MMP20O60882 483 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 GCATO75600 419 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 POP4O95707 220 aaKnown RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 IGSF6O95976 241 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 CSF2P04141 144 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 PRKCGP05129 697 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 CELA2BP08218 269 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 CKMT1AP12532 417 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 PSMA2P25787 234 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 ITPKBP27987 946 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 RABIFP47224 123 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 TPI1P60174 286 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 DAB2P98082 770 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 ILKQ13418 452 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 IRF4Q15306 451 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 PARP15Q460N3 678 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 TP53I13Q8NBR0 393 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 DENND6BQ8NEG7 585 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 FUBP1Q96AE4 644 aaKnown RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 RAB7BQ96AH8 199 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 IFT43Q96FT9 208 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 LENG8Q96PV6 779 aaPredicted RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 OSBPL1AQ9BXW6 950 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 SLC39A8Q9C0K1 460 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 NLGN3Q9NZ94 848 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 PCSK1NQ9UHG2 260 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 MYO6Q9UM54 1294 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 CLCA2Q9UQC9 943 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
VTI1A-208ENST00000494728 ZFC3H1O60293 1989 aaKnown RBP11.78□□□□□ -0.52
VTI1A-208ENST00000494728 A0A1W2PNU3 283 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 ANKRD62A6NC57 917 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 TMEM191CA6NGB0 347 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 NEMP1O14524 444 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 FPGTO14772 594 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 SCAMP1O15126 338 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 MUSKO15146 869 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 FGF10O15520 208 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 BRINP1O60477 761 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 PRAMEF11O60813 436 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 LRCH4O75427 683 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 SKILP12757 684 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 JUNDP17535 347 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 MIPP30301 263 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 PRKCIP41743 596 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 AIF1P55008 147 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 HNRNPKP61978 463 aaKnown RBP eCLIP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 SGCGQ13326 291 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 C1orf61Q13536 156 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 RTP5Q14D33 572 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 IQCB1Q15051 598 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 TCEA2Q15560 299 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 ASIC2Q16515 512 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 DEFB133Q30KQ1 61 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 SOWAHCQ53LP3 525 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 INO80DQ53TQ3 878 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 CDCP2Q5VXM1 449 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 AFMIDQ63HM1 303 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.53
VTI1A-208ENST00000494728 GUSBP11Q6P575 273 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 TTC7BQ86TV6 843 aa11.77□□□□□ -0.53
VTI1A-208ENST00000494728 ASB12Q8WXK4 309 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms